Gene : Brara.H02126 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR10285:SF76 - URIDINE KINASE Genomic Order:  2126
Name:  ? Brara.H02126 Secondary Identifier:  ? PAC:30647600
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7193 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7196 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H02126 0.5kb upstream 0.5kb upstream 4000 true A08: 18909792-18913791 Brassica rapa FPsc
Brara.H02126 0.5kb upstream 0.5kb upstream 500 false A08: 18913292-18913791 Brassica rapa FPsc
Brara.H02126 0.5kb downstream 0.5kb downstream 4000 true A08: 18909292-18913291 Brassica rapa FPsc
Brara.H02126 0.5kb downstream 0.5kb downstream 500 false A08: 18909292-18909791 Brassica rapa FPsc
Brara.H02126 1.0kb upstream 1.0kb upstream 4500 true A08: 18909792-18914291 Brassica rapa FPsc
Brara.H02126 1.0kb upstream 1.0kb upstream 1000 false A08: 18913292-18914291 Brassica rapa FPsc
Brara.H02126 1.0kb downstream 1.0kb downstream 4500 true A08: 18908792-18913291 Brassica rapa FPsc
Brara.H02126 1.0kb downstream 1.0kb downstream 1000 false A08: 18908792-18909791 Brassica rapa FPsc
Brara.H02126 2.0kb upstream 2.0kb upstream 5500 true A08: 18909792-18915291 Brassica rapa FPsc
Brara.H02126 2.0kb upstream 2.0kb upstream 2000 false A08: 18913292-18915291 Brassica rapa FPsc
Brara.H02126 2.0kb downstream 2.0kb downstream 5500 true A08: 18907792-18913291 Brassica rapa FPsc
Brara.H02126 2.0kb downstream 2.0kb downstream 2000 false A08: 18907792-18909791 Brassica rapa FPsc
Brara.H02126 5.0kb upstream 5.0kb upstream 8500 true A08: 18909792-18918291 Brassica rapa FPsc
Brara.H02126 5.0kb upstream 5.0kb upstream 5000 false A08: 18913292-18918291 Brassica rapa FPsc
Brara.H02126 5.0kb downstream 5.0kb downstream 8500 true A08: 18904792-18913291 Brassica rapa FPsc
Brara.H02126 5.0kb downstream 5.0kb downstream 5000 false A08: 18904792-18909791 Brassica rapa FPsc
Brara.H02126 10.0kb upstream 10.0kb upstream 13500 true A08: 18909792-18923291 Brassica rapa FPsc
Brara.H02126 10.0kb upstream 10.0kb upstream 10000 false A08: 18913292-18923291 Brassica rapa FPsc
Brara.H02126 10.0kb downstream 10.0kb downstream 13500 true A08: 18899792-18913291 Brassica rapa FPsc
Brara.H02126 10.0kb downstream 10.0kb downstream 10000 false A08: 18899792-18909791 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122354973 5261 Brassicaceae Singleton cluster - no MSA
123842782 5264 Brassicales-Malvales View MSA
124323771 5266 SBM View MSA
124251331 5268 Malvidae View MSA
124070976 5270 Rosid View MSA
123746405 5271 Pentapetalae View MSA
122786866 5272 Eudicot View MSA
122043584 5273 Angiosperm View MSA
121351427 5274 Embryophyte View MSA
123427517 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier