Gene : Brara.H02142 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR10353:SF26 - BETA-GLUCOSIDASE 40 Genomic Order:  2142
Name:  ? Brara.H02142 Secondary Identifier:  ? PAC:30647197
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5176 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7089 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7091 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7092 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H02142 0.5kb upstream 0.5kb upstream 4286 true A08: 19025340-19029625 Brassica rapa FPsc
Brara.H02142 0.5kb upstream 0.5kb upstream 500 false A08: 19025340-19025839 Brassica rapa FPsc
Brara.H02142 0.5kb downstream 0.5kb downstream 4286 true A08: 19025840-19030125 Brassica rapa FPsc
Brara.H02142 0.5kb downstream 0.5kb downstream 500 false A08: 19029626-19030125 Brassica rapa FPsc
Brara.H02142 1.0kb upstream 1.0kb upstream 4786 true A08: 19024840-19029625 Brassica rapa FPsc
Brara.H02142 1.0kb upstream 1.0kb upstream 1000 false A08: 19024840-19025839 Brassica rapa FPsc
Brara.H02142 1.0kb downstream 1.0kb downstream 4786 true A08: 19025840-19030625 Brassica rapa FPsc
Brara.H02142 1.0kb downstream 1.0kb downstream 1000 false A08: 19029626-19030625 Brassica rapa FPsc
Brara.H02142 2.0kb upstream 2.0kb upstream 5786 true A08: 19023840-19029625 Brassica rapa FPsc
Brara.H02142 2.0kb upstream 2.0kb upstream 2000 false A08: 19023840-19025839 Brassica rapa FPsc
Brara.H02142 2.0kb downstream 2.0kb downstream 5786 true A08: 19025840-19031625 Brassica rapa FPsc
Brara.H02142 2.0kb downstream 2.0kb downstream 2000 false A08: 19029626-19031625 Brassica rapa FPsc
Brara.H02142 5.0kb upstream 5.0kb upstream 8786 true A08: 19020840-19029625 Brassica rapa FPsc
Brara.H02142 5.0kb upstream 5.0kb upstream 5000 false A08: 19020840-19025839 Brassica rapa FPsc
Brara.H02142 5.0kb downstream 5.0kb downstream 8786 true A08: 19025840-19034625 Brassica rapa FPsc
Brara.H02142 5.0kb downstream 5.0kb downstream 5000 false A08: 19029626-19034625 Brassica rapa FPsc
Brara.H02142 10.0kb upstream 10.0kb upstream 13786 true A08: 19015840-19029625 Brassica rapa FPsc
Brara.H02142 10.0kb upstream 10.0kb upstream 10000 false A08: 19015840-19025839 Brassica rapa FPsc
Brara.H02142 10.0kb downstream 10.0kb downstream 13786 true A08: 19025840-19039625 Brassica rapa FPsc
Brara.H02142 10.0kb downstream 10.0kb downstream 10000 false A08: 19029626-19039625 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377243 5261 Brassicaceae View MSA
123830578 5264 Brassicales-Malvales View MSA
124337182 5266 SBM View MSA
124238647 5268 Malvidae View MSA
124061874 5270 Rosid View MSA
123738262 5271 Pentapetalae View MSA
122793131 5272 Eudicot View MSA
122050283 5273 Angiosperm View MSA
121350182 5274 Embryophyte View MSA
123428830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier