Gene : Brara.B01291 B. rapa FPsc v1.3
Defline:  (1 of 7) PTHR32266:SF12 - NICOTIANAMINE SYNTHASE-RELATED Genomic Order:  1291
Name:  ? Brara.B01291 Secondary Identifier:  ? PAC:30608405
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5957 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B01291 0.5kb upstream 0.5kb upstream 1700 true A02: 6819605-6821304 Brassica rapa FPsc
Brara.B01291 0.5kb upstream 0.5kb upstream 500 false A02: 6819605-6820104 Brassica rapa FPsc
Brara.B01291 0.5kb downstream 0.5kb downstream 1700 true A02: 6820105-6821804 Brassica rapa FPsc
Brara.B01291 0.5kb downstream 0.5kb downstream 500 false A02: 6821305-6821804 Brassica rapa FPsc
Brara.B01291 1.0kb upstream 1.0kb upstream 2200 true A02: 6819105-6821304 Brassica rapa FPsc
Brara.B01291 1.0kb upstream 1.0kb upstream 1000 false A02: 6819105-6820104 Brassica rapa FPsc
Brara.B01291 1.0kb downstream 1.0kb downstream 2200 true A02: 6820105-6822304 Brassica rapa FPsc
Brara.B01291 1.0kb downstream 1.0kb downstream 1000 false A02: 6821305-6822304 Brassica rapa FPsc
Brara.B01291 2.0kb upstream 2.0kb upstream 3200 true A02: 6818105-6821304 Brassica rapa FPsc
Brara.B01291 2.0kb upstream 2.0kb upstream 2000 false A02: 6818105-6820104 Brassica rapa FPsc
Brara.B01291 2.0kb downstream 2.0kb downstream 3200 true A02: 6820105-6823304 Brassica rapa FPsc
Brara.B01291 2.0kb downstream 2.0kb downstream 2000 false A02: 6821305-6823304 Brassica rapa FPsc
Brara.B01291 5.0kb upstream 5.0kb upstream 6200 true A02: 6815105-6821304 Brassica rapa FPsc
Brara.B01291 5.0kb upstream 5.0kb upstream 5000 false A02: 6815105-6820104 Brassica rapa FPsc
Brara.B01291 5.0kb downstream 5.0kb downstream 6200 true A02: 6820105-6826304 Brassica rapa FPsc
Brara.B01291 5.0kb downstream 5.0kb downstream 5000 false A02: 6821305-6826304 Brassica rapa FPsc
Brara.B01291 10.0kb upstream 10.0kb upstream 11200 true A02: 6810105-6821304 Brassica rapa FPsc
Brara.B01291 10.0kb upstream 10.0kb upstream 10000 false A02: 6810105-6820104 Brassica rapa FPsc
Brara.B01291 10.0kb downstream 10.0kb downstream 11200 true A02: 6820105-6831304 Brassica rapa FPsc
Brara.B01291 10.0kb downstream 10.0kb downstream 10000 false A02: 6821305-6831304 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369790 5261 Brassicaceae View MSA
123799845 5264 Brassicales-Malvales View MSA
124297326 5266 SBM View MSA
124149250 5268 Malvidae View MSA
124066045 5270 Rosid View MSA
123750791 5271 Pentapetalae View MSA
122792107 5272 Eudicot View MSA
122044478 5273 Angiosperm View MSA
121350055 5274 Embryophyte View MSA
123381558 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier