Gene : Brara.H02003 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR15696:SF3 - PROTEIN SMG7L Genomic Order:  2003
Name:  ? Brara.H02003 Secondary Identifier:  ? PAC:30649616
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H02003 0.5kb upstream 0.5kb upstream 4582 true A08: 18308265-18312846 Brassica rapa FPsc
Brara.H02003 0.5kb upstream 0.5kb upstream 500 false A08: 18308265-18308764 Brassica rapa FPsc
Brara.H02003 0.5kb downstream 0.5kb downstream 4582 true A08: 18308765-18313346 Brassica rapa FPsc
Brara.H02003 0.5kb downstream 0.5kb downstream 500 false A08: 18312847-18313346 Brassica rapa FPsc
Brara.H02003 1.0kb upstream 1.0kb upstream 5082 true A08: 18307765-18312846 Brassica rapa FPsc
Brara.H02003 1.0kb upstream 1.0kb upstream 1000 false A08: 18307765-18308764 Brassica rapa FPsc
Brara.H02003 1.0kb downstream 1.0kb downstream 5082 true A08: 18308765-18313846 Brassica rapa FPsc
Brara.H02003 1.0kb downstream 1.0kb downstream 1000 false A08: 18312847-18313846 Brassica rapa FPsc
Brara.H02003 2.0kb upstream 2.0kb upstream 6082 true A08: 18306765-18312846 Brassica rapa FPsc
Brara.H02003 2.0kb upstream 2.0kb upstream 2000 false A08: 18306765-18308764 Brassica rapa FPsc
Brara.H02003 2.0kb downstream 2.0kb downstream 6082 true A08: 18308765-18314846 Brassica rapa FPsc
Brara.H02003 2.0kb downstream 2.0kb downstream 2000 false A08: 18312847-18314846 Brassica rapa FPsc
Brara.H02003 5.0kb upstream 5.0kb upstream 9082 true A08: 18303765-18312846 Brassica rapa FPsc
Brara.H02003 5.0kb upstream 5.0kb upstream 5000 false A08: 18303765-18308764 Brassica rapa FPsc
Brara.H02003 5.0kb downstream 5.0kb downstream 9082 true A08: 18308765-18317846 Brassica rapa FPsc
Brara.H02003 5.0kb downstream 5.0kb downstream 5000 false A08: 18312847-18317846 Brassica rapa FPsc
Brara.H02003 10.0kb upstream 10.0kb upstream 14082 true A08: 18298765-18312846 Brassica rapa FPsc
Brara.H02003 10.0kb upstream 10.0kb upstream 10000 false A08: 18298765-18308764 Brassica rapa FPsc
Brara.H02003 10.0kb downstream 10.0kb downstream 14082 true A08: 18308765-18322846 Brassica rapa FPsc
Brara.H02003 10.0kb downstream 10.0kb downstream 10000 false A08: 18312847-18322846 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122355564 5261 Brassicaceae Singleton cluster - no MSA
123793787 5264 Brassicales-Malvales Singleton cluster - no MSA
124350092 5266 SBM View MSA
124242900 5268 Malvidae View MSA
124050275 5270 Rosid View MSA
123740560 5271 Pentapetalae View MSA
122792675 5272 Eudicot View MSA
122043425 5273 Angiosperm View MSA
121310120 5274 Embryophyte View MSA
123426231 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier