Gene : Brara.H02043 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR10896:SF20 - GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE I Genomic Order:  2043
Name:  ? Brara.H02043 Secondary Identifier:  ? PAC:30648614
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5800 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H02043 0.5kb upstream 0.5kb upstream 2844 true A08: 18508235-18511078 Brassica rapa FPsc
Brara.H02043 0.5kb upstream 0.5kb upstream 500 false A08: 18508235-18508734 Brassica rapa FPsc
Brara.H02043 0.5kb downstream 0.5kb downstream 2844 true A08: 18508735-18511578 Brassica rapa FPsc
Brara.H02043 0.5kb downstream 0.5kb downstream 500 false A08: 18511079-18511578 Brassica rapa FPsc
Brara.H02043 1.0kb upstream 1.0kb upstream 3344 true A08: 18507735-18511078 Brassica rapa FPsc
Brara.H02043 1.0kb upstream 1.0kb upstream 1000 false A08: 18507735-18508734 Brassica rapa FPsc
Brara.H02043 1.0kb downstream 1.0kb downstream 3344 true A08: 18508735-18512078 Brassica rapa FPsc
Brara.H02043 1.0kb downstream 1.0kb downstream 1000 false A08: 18511079-18512078 Brassica rapa FPsc
Brara.H02043 2.0kb upstream 2.0kb upstream 4344 true A08: 18506735-18511078 Brassica rapa FPsc
Brara.H02043 2.0kb upstream 2.0kb upstream 2000 false A08: 18506735-18508734 Brassica rapa FPsc
Brara.H02043 2.0kb downstream 2.0kb downstream 4344 true A08: 18508735-18513078 Brassica rapa FPsc
Brara.H02043 2.0kb downstream 2.0kb downstream 2000 false A08: 18511079-18513078 Brassica rapa FPsc
Brara.H02043 5.0kb upstream 5.0kb upstream 7344 true A08: 18503735-18511078 Brassica rapa FPsc
Brara.H02043 5.0kb upstream 5.0kb upstream 5000 false A08: 18503735-18508734 Brassica rapa FPsc
Brara.H02043 5.0kb downstream 5.0kb downstream 7344 true A08: 18508735-18516078 Brassica rapa FPsc
Brara.H02043 5.0kb downstream 5.0kb downstream 5000 false A08: 18511079-18516078 Brassica rapa FPsc
Brara.H02043 10.0kb upstream 10.0kb upstream 12344 true A08: 18498735-18511078 Brassica rapa FPsc
Brara.H02043 10.0kb upstream 10.0kb upstream 10000 false A08: 18498735-18508734 Brassica rapa FPsc
Brara.H02043 10.0kb downstream 10.0kb downstream 12344 true A08: 18508735-18521078 Brassica rapa FPsc
Brara.H02043 10.0kb downstream 10.0kb downstream 10000 false A08: 18511079-18521078 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372036 5261 Brassicaceae View MSA
123829851 5264 Brassicales-Malvales View MSA
124351012 5266 SBM View MSA
124252838 5268 Malvidae View MSA
124065627 5270 Rosid View MSA
123748669 5271 Pentapetalae View MSA
122794067 5272 Eudicot View MSA
122050395 5273 Angiosperm View MSA
121346281 5274 Embryophyte View MSA
123380360 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier