Gene : Brara.H01867 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR11476:SF5 - CLASS II AARS AND BIOTIN SYNTHETASES SUPERFAMILY PROTEIN-RELATED Genomic Order:  1867
Name:  ? Brara.H01867 Secondary Identifier:  ? PAC:30648695
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc TRNA-CHARGING-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H01867 0.5kb upstream 0.5kb upstream 2987 true A08: 17594677-17597663 Brassica rapa FPsc
Brara.H01867 0.5kb upstream 0.5kb upstream 500 false A08: 17597164-17597663 Brassica rapa FPsc
Brara.H01867 0.5kb downstream 0.5kb downstream 2987 true A08: 17594177-17597163 Brassica rapa FPsc
Brara.H01867 0.5kb downstream 0.5kb downstream 500 false A08: 17594177-17594676 Brassica rapa FPsc
Brara.H01867 1.0kb upstream 1.0kb upstream 3487 true A08: 17594677-17598163 Brassica rapa FPsc
Brara.H01867 1.0kb upstream 1.0kb upstream 1000 false A08: 17597164-17598163 Brassica rapa FPsc
Brara.H01867 1.0kb downstream 1.0kb downstream 3487 true A08: 17593677-17597163 Brassica rapa FPsc
Brara.H01867 1.0kb downstream 1.0kb downstream 1000 false A08: 17593677-17594676 Brassica rapa FPsc
Brara.H01867 2.0kb upstream 2.0kb upstream 4487 true A08: 17594677-17599163 Brassica rapa FPsc
Brara.H01867 2.0kb upstream 2.0kb upstream 2000 false A08: 17597164-17599163 Brassica rapa FPsc
Brara.H01867 2.0kb downstream 2.0kb downstream 4487 true A08: 17592677-17597163 Brassica rapa FPsc
Brara.H01867 2.0kb downstream 2.0kb downstream 2000 false A08: 17592677-17594676 Brassica rapa FPsc
Brara.H01867 5.0kb upstream 5.0kb upstream 7487 true A08: 17594677-17602163 Brassica rapa FPsc
Brara.H01867 5.0kb upstream 5.0kb upstream 5000 false A08: 17597164-17602163 Brassica rapa FPsc
Brara.H01867 5.0kb downstream 5.0kb downstream 7487 true A08: 17589677-17597163 Brassica rapa FPsc
Brara.H01867 5.0kb downstream 5.0kb downstream 5000 false A08: 17589677-17594676 Brassica rapa FPsc
Brara.H01867 10.0kb upstream 10.0kb upstream 12487 true A08: 17594677-17607163 Brassica rapa FPsc
Brara.H01867 10.0kb upstream 10.0kb upstream 10000 false A08: 17597164-17607163 Brassica rapa FPsc
Brara.H01867 10.0kb downstream 10.0kb downstream 12487 true A08: 17584677-17597163 Brassica rapa FPsc
Brara.H01867 10.0kb downstream 10.0kb downstream 10000 false A08: 17584677-17594676 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371522 5261 Brassicaceae View MSA
123828027 5264 Brassicales-Malvales View MSA
124321502 5266 SBM View MSA
124242032 5268 Malvidae View MSA
124069172 5270 Rosid View MSA
123739559 5271 Pentapetalae View MSA
122792579 5272 Eudicot View MSA
122042038 5273 Angiosperm View MSA
121344697 5274 Embryophyte View MSA
123424484 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier