Gene : Brara.H01891 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR34195:SF2 - PHOTOSYSTEM I REACTION CENTER SUBUNIT PSAK, CHLOROPLASTIC Genomic Order:  1891
Name:  ? Brara.H01891 Secondary Identifier:  ? PAC:30647866
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PHOTOALL-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-101 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H01891 0.5kb upstream 0.5kb upstream 1501 true A08: 17707079-17708579 Brassica rapa FPsc
Brara.H01891 0.5kb upstream 0.5kb upstream 500 false A08: 17708080-17708579 Brassica rapa FPsc
Brara.H01891 0.5kb downstream 0.5kb downstream 1501 true A08: 17706579-17708079 Brassica rapa FPsc
Brara.H01891 0.5kb downstream 0.5kb downstream 500 false A08: 17706579-17707078 Brassica rapa FPsc
Brara.H01891 1.0kb upstream 1.0kb upstream 2001 true A08: 17707079-17709079 Brassica rapa FPsc
Brara.H01891 1.0kb upstream 1.0kb upstream 1000 false A08: 17708080-17709079 Brassica rapa FPsc
Brara.H01891 1.0kb downstream 1.0kb downstream 2001 true A08: 17706079-17708079 Brassica rapa FPsc
Brara.H01891 1.0kb downstream 1.0kb downstream 1000 false A08: 17706079-17707078 Brassica rapa FPsc
Brara.H01891 2.0kb upstream 2.0kb upstream 3001 true A08: 17707079-17710079 Brassica rapa FPsc
Brara.H01891 2.0kb upstream 2.0kb upstream 2000 false A08: 17708080-17710079 Brassica rapa FPsc
Brara.H01891 2.0kb downstream 2.0kb downstream 3001 true A08: 17705079-17708079 Brassica rapa FPsc
Brara.H01891 2.0kb downstream 2.0kb downstream 2000 false A08: 17705079-17707078 Brassica rapa FPsc
Brara.H01891 5.0kb upstream 5.0kb upstream 6001 true A08: 17707079-17713079 Brassica rapa FPsc
Brara.H01891 5.0kb upstream 5.0kb upstream 5000 false A08: 17708080-17713079 Brassica rapa FPsc
Brara.H01891 5.0kb downstream 5.0kb downstream 6001 true A08: 17702079-17708079 Brassica rapa FPsc
Brara.H01891 5.0kb downstream 5.0kb downstream 5000 false A08: 17702079-17707078 Brassica rapa FPsc
Brara.H01891 10.0kb upstream 10.0kb upstream 11001 true A08: 17707079-17718079 Brassica rapa FPsc
Brara.H01891 10.0kb upstream 10.0kb upstream 10000 false A08: 17708080-17718079 Brassica rapa FPsc
Brara.H01891 10.0kb downstream 10.0kb downstream 11001 true A08: 17697079-17708079 Brassica rapa FPsc
Brara.H01891 10.0kb downstream 10.0kb downstream 10000 false A08: 17697079-17707078 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378578 5261 Brassicaceae View MSA
123833502 5264 Brassicales-Malvales View MSA
124342197 5266 SBM View MSA
124242965 5268 Malvidae View MSA
124064022 5270 Rosid View MSA
123739111 5271 Pentapetalae View MSA
122786435 5272 Eudicot View MSA
122044551 5273 Angiosperm View MSA
121347312 5274 Embryophyte View MSA
123425033 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier