Gene : Brara.B01180 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR10217:SF500 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 5-RELATED Genomic Order:  1180
Name:  ? Brara.B01180 Secondary Identifier:  ? PAC:30607758
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B01180 0.5kb upstream 0.5kb upstream 4195 true A02: 5905375-5909569 Brassica rapa FPsc
Brara.B01180 0.5kb upstream 0.5kb upstream 500 false A02: 5909070-5909569 Brassica rapa FPsc
Brara.B01180 0.5kb downstream 0.5kb downstream 4195 true A02: 5904875-5909069 Brassica rapa FPsc
Brara.B01180 0.5kb downstream 0.5kb downstream 500 false A02: 5904875-5905374 Brassica rapa FPsc
Brara.B01180 1.0kb upstream 1.0kb upstream 4695 true A02: 5905375-5910069 Brassica rapa FPsc
Brara.B01180 1.0kb upstream 1.0kb upstream 1000 false A02: 5909070-5910069 Brassica rapa FPsc
Brara.B01180 1.0kb downstream 1.0kb downstream 4695 true A02: 5904375-5909069 Brassica rapa FPsc
Brara.B01180 1.0kb downstream 1.0kb downstream 1000 false A02: 5904375-5905374 Brassica rapa FPsc
Brara.B01180 2.0kb upstream 2.0kb upstream 5695 true A02: 5905375-5911069 Brassica rapa FPsc
Brara.B01180 2.0kb upstream 2.0kb upstream 2000 false A02: 5909070-5911069 Brassica rapa FPsc
Brara.B01180 2.0kb downstream 2.0kb downstream 5695 true A02: 5903375-5909069 Brassica rapa FPsc
Brara.B01180 2.0kb downstream 2.0kb downstream 2000 false A02: 5903375-5905374 Brassica rapa FPsc
Brara.B01180 5.0kb upstream 5.0kb upstream 8695 true A02: 5905375-5914069 Brassica rapa FPsc
Brara.B01180 5.0kb upstream 5.0kb upstream 5000 false A02: 5909070-5914069 Brassica rapa FPsc
Brara.B01180 5.0kb downstream 5.0kb downstream 8695 true A02: 5900375-5909069 Brassica rapa FPsc
Brara.B01180 5.0kb downstream 5.0kb downstream 5000 false A02: 5900375-5905374 Brassica rapa FPsc
Brara.B01180 10.0kb upstream 10.0kb upstream 13695 true A02: 5905375-5919069 Brassica rapa FPsc
Brara.B01180 10.0kb upstream 10.0kb upstream 10000 false A02: 5909070-5919069 Brassica rapa FPsc
Brara.B01180 10.0kb downstream 10.0kb downstream 13695 true A02: 5895375-5909069 Brassica rapa FPsc
Brara.B01180 10.0kb downstream 10.0kb downstream 10000 false A02: 5895375-5905374 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368736 5261 Brassicaceae View MSA
123838006 5264 Brassicales-Malvales View MSA
124340121 5266 SBM View MSA
124238344 5268 Malvidae View MSA
124064062 5270 Rosid View MSA
123748998 5271 Pentapetalae View MSA
122786679 5272 Eudicot View MSA
122043565 5273 Angiosperm View MSA
121351754 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

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