Gene : Brara.B00970 B. rapa FPsc v1.3
Defline:  (1 of 122) 1.11.1.7 - Peroxidase / Lactoperoxidase Genomic Order:  970
Name:  ? Brara.B00970 Secondary Identifier:  ? PAC:30609726
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5466 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7214 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7445 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B00970 0.5kb upstream 0.5kb upstream 1961 true A02: 4626202-4628162 Brassica rapa FPsc
Brara.B00970 0.5kb upstream 0.5kb upstream 500 false A02: 4626202-4626701 Brassica rapa FPsc
Brara.B00970 0.5kb downstream 0.5kb downstream 1961 true A02: 4626702-4628662 Brassica rapa FPsc
Brara.B00970 0.5kb downstream 0.5kb downstream 500 false A02: 4628163-4628662 Brassica rapa FPsc
Brara.B00970 1.0kb upstream 1.0kb upstream 2461 true A02: 4625702-4628162 Brassica rapa FPsc
Brara.B00970 1.0kb upstream 1.0kb upstream 1000 false A02: 4625702-4626701 Brassica rapa FPsc
Brara.B00970 1.0kb downstream 1.0kb downstream 2461 true A02: 4626702-4629162 Brassica rapa FPsc
Brara.B00970 1.0kb downstream 1.0kb downstream 1000 false A02: 4628163-4629162 Brassica rapa FPsc
Brara.B00970 2.0kb upstream 2.0kb upstream 3461 true A02: 4624702-4628162 Brassica rapa FPsc
Brara.B00970 2.0kb upstream 2.0kb upstream 2000 false A02: 4624702-4626701 Brassica rapa FPsc
Brara.B00970 2.0kb downstream 2.0kb downstream 3461 true A02: 4626702-4630162 Brassica rapa FPsc
Brara.B00970 2.0kb downstream 2.0kb downstream 2000 false A02: 4628163-4630162 Brassica rapa FPsc
Brara.B00970 5.0kb upstream 5.0kb upstream 6461 true A02: 4621702-4628162 Brassica rapa FPsc
Brara.B00970 5.0kb upstream 5.0kb upstream 5000 false A02: 4621702-4626701 Brassica rapa FPsc
Brara.B00970 5.0kb downstream 5.0kb downstream 6461 true A02: 4626702-4633162 Brassica rapa FPsc
Brara.B00970 5.0kb downstream 5.0kb downstream 5000 false A02: 4628163-4633162 Brassica rapa FPsc
Brara.B00970 10.0kb upstream 10.0kb upstream 11461 true A02: 4616702-4628162 Brassica rapa FPsc
Brara.B00970 10.0kb upstream 10.0kb upstream 10000 false A02: 4616702-4626701 Brassica rapa FPsc
Brara.B00970 10.0kb downstream 10.0kb downstream 11461 true A02: 4626702-4638162 Brassica rapa FPsc
Brara.B00970 10.0kb downstream 10.0kb downstream 10000 false A02: 4628163-4638162 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363507 5261 Brassicaceae View MSA
123834251 5264 Brassicales-Malvales View MSA
124341935 5266 SBM View MSA
124244557 5268 Malvidae View MSA
124063929 5270 Rosid View MSA
123745687 5271 Pentapetalae View MSA
122794580 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier