Gene : Brara.B00962 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR23088//PTHR23088:SF31 - NITRILASE-RELATED Genomic Order:  962
Name:  ? Brara.B00962 Secondary Identifier:  ? PAC:30607343
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ASPARAGINE-DEG1-PWY Brassica rapa FPsc pathologic  
BrapaFPsc ASPSYNII-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B00962 0.5kb upstream 0.5kb upstream 3861 true A02: 4592693-4596553 Brassica rapa FPsc
Brara.B00962 0.5kb upstream 0.5kb upstream 500 false A02: 4592693-4593192 Brassica rapa FPsc
Brara.B00962 0.5kb downstream 0.5kb downstream 3861 true A02: 4593193-4597053 Brassica rapa FPsc
Brara.B00962 0.5kb downstream 0.5kb downstream 500 false A02: 4596554-4597053 Brassica rapa FPsc
Brara.B00962 1.0kb upstream 1.0kb upstream 4361 true A02: 4592193-4596553 Brassica rapa FPsc
Brara.B00962 1.0kb upstream 1.0kb upstream 1000 false A02: 4592193-4593192 Brassica rapa FPsc
Brara.B00962 1.0kb downstream 1.0kb downstream 4361 true A02: 4593193-4597553 Brassica rapa FPsc
Brara.B00962 1.0kb downstream 1.0kb downstream 1000 false A02: 4596554-4597553 Brassica rapa FPsc
Brara.B00962 2.0kb upstream 2.0kb upstream 5361 true A02: 4591193-4596553 Brassica rapa FPsc
Brara.B00962 2.0kb upstream 2.0kb upstream 2000 false A02: 4591193-4593192 Brassica rapa FPsc
Brara.B00962 2.0kb downstream 2.0kb downstream 5361 true A02: 4593193-4598553 Brassica rapa FPsc
Brara.B00962 2.0kb downstream 2.0kb downstream 2000 false A02: 4596554-4598553 Brassica rapa FPsc
Brara.B00962 5.0kb upstream 5.0kb upstream 8361 true A02: 4588193-4596553 Brassica rapa FPsc
Brara.B00962 5.0kb upstream 5.0kb upstream 5000 false A02: 4588193-4593192 Brassica rapa FPsc
Brara.B00962 5.0kb downstream 5.0kb downstream 8361 true A02: 4593193-4601553 Brassica rapa FPsc
Brara.B00962 5.0kb downstream 5.0kb downstream 5000 false A02: 4596554-4601553 Brassica rapa FPsc
Brara.B00962 10.0kb upstream 10.0kb upstream 13361 true A02: 4583193-4596553 Brassica rapa FPsc
Brara.B00962 10.0kb upstream 10.0kb upstream 10000 false A02: 4583193-4593192 Brassica rapa FPsc
Brara.B00962 10.0kb downstream 10.0kb downstream 13361 true A02: 4593193-4606553 Brassica rapa FPsc
Brara.B00962 10.0kb downstream 10.0kb downstream 10000 false A02: 4596554-4606553 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374237 5261 Brassicaceae View MSA
123835096 5264 Brassicales-Malvales View MSA
124343016 5266 SBM View MSA
124248839 5268 Malvidae View MSA
124063597 5270 Rosid View MSA
123751549 5271 Pentapetalae View MSA
122796633 5272 Eudicot View MSA
122043736 5273 Angiosperm View MSA
121347314 5274 Embryophyte View MSA
123380526 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier