Gene : Brara.B01042 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR10782:SF34 - E3 SUMO-PROTEIN LIGASE SIZ1 Genomic Order:  1042
Name:  ? Brara.B01042 Secondary Identifier:  ? PAC:30610735
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B01042 0.5kb upstream 0.5kb upstream 6394 true A02: 5139862-5146255 Brassica rapa FPsc
Brara.B01042 0.5kb upstream 0.5kb upstream 500 false A02: 5139862-5140361 Brassica rapa FPsc
Brara.B01042 0.5kb downstream 0.5kb downstream 6394 true A02: 5140362-5146755 Brassica rapa FPsc
Brara.B01042 0.5kb downstream 0.5kb downstream 500 false A02: 5146256-5146755 Brassica rapa FPsc
Brara.B01042 1.0kb upstream 1.0kb upstream 6894 true A02: 5139362-5146255 Brassica rapa FPsc
Brara.B01042 1.0kb upstream 1.0kb upstream 1000 false A02: 5139362-5140361 Brassica rapa FPsc
Brara.B01042 1.0kb downstream 1.0kb downstream 6894 true A02: 5140362-5147255 Brassica rapa FPsc
Brara.B01042 1.0kb downstream 1.0kb downstream 1000 false A02: 5146256-5147255 Brassica rapa FPsc
Brara.B01042 2.0kb upstream 2.0kb upstream 7894 true A02: 5138362-5146255 Brassica rapa FPsc
Brara.B01042 2.0kb upstream 2.0kb upstream 2000 false A02: 5138362-5140361 Brassica rapa FPsc
Brara.B01042 2.0kb downstream 2.0kb downstream 7894 true A02: 5140362-5148255 Brassica rapa FPsc
Brara.B01042 2.0kb downstream 2.0kb downstream 2000 false A02: 5146256-5148255 Brassica rapa FPsc
Brara.B01042 5.0kb upstream 5.0kb upstream 10894 true A02: 5135362-5146255 Brassica rapa FPsc
Brara.B01042 5.0kb upstream 5.0kb upstream 5000 false A02: 5135362-5140361 Brassica rapa FPsc
Brara.B01042 5.0kb downstream 5.0kb downstream 10894 true A02: 5140362-5151255 Brassica rapa FPsc
Brara.B01042 5.0kb downstream 5.0kb downstream 5000 false A02: 5146256-5151255 Brassica rapa FPsc
Brara.B01042 10.0kb upstream 10.0kb upstream 15894 true A02: 5130362-5146255 Brassica rapa FPsc
Brara.B01042 10.0kb upstream 10.0kb upstream 10000 false A02: 5130362-5140361 Brassica rapa FPsc
Brara.B01042 10.0kb downstream 10.0kb downstream 15894 true A02: 5140362-5156255 Brassica rapa FPsc
Brara.B01042 10.0kb downstream 10.0kb downstream 10000 false A02: 5146256-5156255 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375146 5261 Brassicaceae View MSA
123836950 5264 Brassicales-Malvales View MSA
124338996 5266 SBM View MSA
124242030 5268 Malvidae View MSA
124063048 5270 Rosid View MSA
123737039 5271 Pentapetalae View MSA
122786497 5272 Eudicot View MSA
122046306 5273 Angiosperm View MSA
121350287 5274 Embryophyte View MSA
123426833 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier