Gene : Brara.B01074 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR21327:SF7 - MONOFUNCTIONAL RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBA 3, CHLOROPLASTIC Genomic Order:  1074
Name:  ? Brara.B01074 Secondary Identifier:  ? PAC:30607970
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc RIBOSYN2-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B01074 0.5kb upstream 0.5kb upstream 3170 true A02: 5339264-5342433 Brassica rapa FPsc
Brara.B01074 0.5kb upstream 0.5kb upstream 500 false A02: 5341934-5342433 Brassica rapa FPsc
Brara.B01074 0.5kb downstream 0.5kb downstream 3170 true A02: 5338764-5341933 Brassica rapa FPsc
Brara.B01074 0.5kb downstream 0.5kb downstream 500 false A02: 5338764-5339263 Brassica rapa FPsc
Brara.B01074 1.0kb upstream 1.0kb upstream 3670 true A02: 5339264-5342933 Brassica rapa FPsc
Brara.B01074 1.0kb upstream 1.0kb upstream 1000 false A02: 5341934-5342933 Brassica rapa FPsc
Brara.B01074 1.0kb downstream 1.0kb downstream 3670 true A02: 5338264-5341933 Brassica rapa FPsc
Brara.B01074 1.0kb downstream 1.0kb downstream 1000 false A02: 5338264-5339263 Brassica rapa FPsc
Brara.B01074 2.0kb upstream 2.0kb upstream 4670 true A02: 5339264-5343933 Brassica rapa FPsc
Brara.B01074 2.0kb upstream 2.0kb upstream 2000 false A02: 5341934-5343933 Brassica rapa FPsc
Brara.B01074 2.0kb downstream 2.0kb downstream 4670 true A02: 5337264-5341933 Brassica rapa FPsc
Brara.B01074 2.0kb downstream 2.0kb downstream 2000 false A02: 5337264-5339263 Brassica rapa FPsc
Brara.B01074 5.0kb upstream 5.0kb upstream 7670 true A02: 5339264-5346933 Brassica rapa FPsc
Brara.B01074 5.0kb upstream 5.0kb upstream 5000 false A02: 5341934-5346933 Brassica rapa FPsc
Brara.B01074 5.0kb downstream 5.0kb downstream 7670 true A02: 5334264-5341933 Brassica rapa FPsc
Brara.B01074 5.0kb downstream 5.0kb downstream 5000 false A02: 5334264-5339263 Brassica rapa FPsc
Brara.B01074 10.0kb upstream 10.0kb upstream 12670 true A02: 5339264-5351933 Brassica rapa FPsc
Brara.B01074 10.0kb upstream 10.0kb upstream 10000 false A02: 5341934-5351933 Brassica rapa FPsc
Brara.B01074 10.0kb downstream 10.0kb downstream 12670 true A02: 5329264-5341933 Brassica rapa FPsc
Brara.B01074 10.0kb downstream 10.0kb downstream 10000 false A02: 5329264-5339263 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374066 5261 Brassicaceae View MSA
123830516 5264 Brassicales-Malvales View MSA
124342854 5266 SBM View MSA
124241994 5268 Malvidae View MSA
124062618 5270 Rosid View MSA
123745495 5271 Pentapetalae View MSA
122786383 5272 Eudicot View MSA
122046960 5273 Angiosperm View MSA
121310676 5274 Embryophyte View MSA
123348102 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier