Gene : Brara.B01065 B. rapa FPsc v1.3
Defline:  (1 of 25) PF16135 - TPL-binding domain in jasmonate signalling (Jas) Genomic Order:  1065
Name:  ? Brara.B01065 Secondary Identifier:  ? PAC:30609196
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B01065 0.5kb upstream 0.5kb upstream 2350 true A02: 5274736-5277085 Brassica rapa FPsc
Brara.B01065 0.5kb upstream 0.5kb upstream 500 false A02: 5276586-5277085 Brassica rapa FPsc
Brara.B01065 0.5kb downstream 0.5kb downstream 2350 true A02: 5274236-5276585 Brassica rapa FPsc
Brara.B01065 0.5kb downstream 0.5kb downstream 500 false A02: 5274236-5274735 Brassica rapa FPsc
Brara.B01065 1.0kb upstream 1.0kb upstream 2850 true A02: 5274736-5277585 Brassica rapa FPsc
Brara.B01065 1.0kb upstream 1.0kb upstream 1000 false A02: 5276586-5277585 Brassica rapa FPsc
Brara.B01065 1.0kb downstream 1.0kb downstream 2850 true A02: 5273736-5276585 Brassica rapa FPsc
Brara.B01065 1.0kb downstream 1.0kb downstream 1000 false A02: 5273736-5274735 Brassica rapa FPsc
Brara.B01065 2.0kb upstream 2.0kb upstream 3850 true A02: 5274736-5278585 Brassica rapa FPsc
Brara.B01065 2.0kb upstream 2.0kb upstream 2000 false A02: 5276586-5278585 Brassica rapa FPsc
Brara.B01065 2.0kb downstream 2.0kb downstream 3850 true A02: 5272736-5276585 Brassica rapa FPsc
Brara.B01065 2.0kb downstream 2.0kb downstream 2000 false A02: 5272736-5274735 Brassica rapa FPsc
Brara.B01065 5.0kb upstream 5.0kb upstream 6850 true A02: 5274736-5281585 Brassica rapa FPsc
Brara.B01065 5.0kb upstream 5.0kb upstream 5000 false A02: 5276586-5281585 Brassica rapa FPsc
Brara.B01065 5.0kb downstream 5.0kb downstream 6850 true A02: 5269736-5276585 Brassica rapa FPsc
Brara.B01065 5.0kb downstream 5.0kb downstream 5000 false A02: 5269736-5274735 Brassica rapa FPsc
Brara.B01065 10.0kb upstream 10.0kb upstream 11850 true A02: 5274736-5286585 Brassica rapa FPsc
Brara.B01065 10.0kb upstream 10.0kb upstream 10000 false A02: 5276586-5286585 Brassica rapa FPsc
Brara.B01065 10.0kb downstream 10.0kb downstream 11850 true A02: 5264736-5276585 Brassica rapa FPsc
Brara.B01065 10.0kb downstream 10.0kb downstream 10000 false A02: 5264736-5274735 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365753 5261 Brassicaceae View MSA
123834835 5264 Brassicales-Malvales View MSA
124340755 5266 SBM View MSA
124237699 5268 Malvidae View MSA
124065450 5270 Rosid View MSA
123747463 5271 Pentapetalae View MSA
122794643 5272 Eudicot View MSA
122051104 5273 Angiosperm View MSA
121312296 5274 Embryophyte View MSA
123349483 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier