Gene : Brara.B00877 B. rapa FPsc v1.3
Defline:  (1 of 6) 2.4.1.14 - Sucrose-phosphate synthase / UDP-glucose-fructose-phosphate glucosyltransferase Genomic Order:  877
Name:  ? Brara.B00877 Secondary Identifier:  ? PAC:30606985
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7238 Brassica rapa FPsc pathologic  
BrapaFPsc SUCSYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B00877 0.5kb upstream 0.5kb upstream 6197 true A02: 4121142-4127338 Brassica rapa FPsc
Brara.B00877 0.5kb upstream 0.5kb upstream 500 false A02: 4126839-4127338 Brassica rapa FPsc
Brara.B00877 0.5kb downstream 0.5kb downstream 6197 true A02: 4120642-4126838 Brassica rapa FPsc
Brara.B00877 0.5kb downstream 0.5kb downstream 500 false A02: 4120642-4121141 Brassica rapa FPsc
Brara.B00877 1.0kb upstream 1.0kb upstream 6697 true A02: 4121142-4127838 Brassica rapa FPsc
Brara.B00877 1.0kb upstream 1.0kb upstream 1000 false A02: 4126839-4127838 Brassica rapa FPsc
Brara.B00877 1.0kb downstream 1.0kb downstream 6697 true A02: 4120142-4126838 Brassica rapa FPsc
Brara.B00877 1.0kb downstream 1.0kb downstream 1000 false A02: 4120142-4121141 Brassica rapa FPsc
Brara.B00877 2.0kb upstream 2.0kb upstream 7697 true A02: 4121142-4128838 Brassica rapa FPsc
Brara.B00877 2.0kb upstream 2.0kb upstream 2000 false A02: 4126839-4128838 Brassica rapa FPsc
Brara.B00877 2.0kb downstream 2.0kb downstream 7697 true A02: 4119142-4126838 Brassica rapa FPsc
Brara.B00877 2.0kb downstream 2.0kb downstream 2000 false A02: 4119142-4121141 Brassica rapa FPsc
Brara.B00877 5.0kb upstream 5.0kb upstream 10697 true A02: 4121142-4131838 Brassica rapa FPsc
Brara.B00877 5.0kb upstream 5.0kb upstream 5000 false A02: 4126839-4131838 Brassica rapa FPsc
Brara.B00877 5.0kb downstream 5.0kb downstream 10697 true A02: 4116142-4126838 Brassica rapa FPsc
Brara.B00877 5.0kb downstream 5.0kb downstream 5000 false A02: 4116142-4121141 Brassica rapa FPsc
Brara.B00877 10.0kb upstream 10.0kb upstream 15697 true A02: 4121142-4136838 Brassica rapa FPsc
Brara.B00877 10.0kb upstream 10.0kb upstream 10000 false A02: 4126839-4136838 Brassica rapa FPsc
Brara.B00877 10.0kb downstream 10.0kb downstream 15697 true A02: 4111142-4126838 Brassica rapa FPsc
Brara.B00877 10.0kb downstream 10.0kb downstream 10000 false A02: 4111142-4121141 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344509 5261 Brassicaceae Singleton cluster - no MSA
123784507 5264 Brassicales-Malvales Singleton cluster - no MSA
124282680 5266 SBM Singleton cluster - no MSA
124251669 5268 Malvidae View MSA
124062800 5270 Rosid View MSA
123741512 5271 Pentapetalae View MSA
122790617 5272 Eudicot View MSA
122047849 5273 Angiosperm View MSA
121310805 5274 Embryophyte View MSA
123348202 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier