Gene : Brara.H01499 B. rapa FPsc v1.3

Defline:  (1 of 1) PTHR12818:SF0 - NEF-ASSOCIATED PROTEIN 1 Genomic Order:  1499
Name:  ? Brara.H01499 Secondary Identifier:  ? PAC:30648158

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H01499 0.5kb upstream 0.5kb upstream 2832 true A08: 15488419-15491250 Brassica rapa FPsc
Brara.H01499 0.5kb upstream 0.5kb upstream 500 false A08: 15488419-15488918 Brassica rapa FPsc
Brara.H01499 0.5kb downstream 0.5kb downstream 2832 true A08: 15488919-15491750 Brassica rapa FPsc
Brara.H01499 0.5kb downstream 0.5kb downstream 500 false A08: 15491251-15491750 Brassica rapa FPsc
Brara.H01499 1.0kb upstream 1.0kb upstream 3332 true A08: 15487919-15491250 Brassica rapa FPsc
Brara.H01499 1.0kb upstream 1.0kb upstream 1000 false A08: 15487919-15488918 Brassica rapa FPsc
Brara.H01499 1.0kb downstream 1.0kb downstream 3332 true A08: 15488919-15492250 Brassica rapa FPsc
Brara.H01499 1.0kb downstream 1.0kb downstream 1000 false A08: 15491251-15492250 Brassica rapa FPsc
Brara.H01499 2.0kb upstream 2.0kb upstream 4332 true A08: 15486919-15491250 Brassica rapa FPsc
Brara.H01499 2.0kb upstream 2.0kb upstream 2000 false A08: 15486919-15488918 Brassica rapa FPsc
Brara.H01499 2.0kb downstream 2.0kb downstream 4332 true A08: 15488919-15493250 Brassica rapa FPsc
Brara.H01499 2.0kb downstream 2.0kb downstream 2000 false A08: 15491251-15493250 Brassica rapa FPsc
Brara.H01499 5.0kb upstream 5.0kb upstream 7332 true A08: 15483919-15491250 Brassica rapa FPsc
Brara.H01499 5.0kb upstream 5.0kb upstream 5000 false A08: 15483919-15488918 Brassica rapa FPsc
Brara.H01499 5.0kb downstream 5.0kb downstream 7332 true A08: 15488919-15496250 Brassica rapa FPsc
Brara.H01499 5.0kb downstream 5.0kb downstream 5000 false A08: 15491251-15496250 Brassica rapa FPsc
Brara.H01499 10.0kb upstream 10.0kb upstream 12332 true A08: 15478919-15491250 Brassica rapa FPsc
Brara.H01499 10.0kb upstream 10.0kb upstream 10000 false A08: 15478919-15488918 Brassica rapa FPsc
Brara.H01499 10.0kb downstream 10.0kb downstream 12332 true A08: 15488919-15501250 Brassica rapa FPsc
Brara.H01499 10.0kb downstream 10.0kb downstream 10000 false A08: 15491251-15501250 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369300 5261 Brassicaceae View MSA
123827422 5264 Brassicales-Malvales View MSA
124341116 5266 SBM View MSA
124239899 5268 Malvidae View MSA
124061130 5270 Rosid View MSA
123737004 5271 Pentapetalae View MSA
122788525 5272 Eudicot View MSA
122041749 5273 Angiosperm View MSA
121344113 5274 Embryophyte View MSA
123423900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier