Gene : Brara.B00887 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR10168:SF112 - GLUTAREDOXIN-C4 Genomic Order:  887
Name:  ? Brara.B00887 Secondary Identifier:  ? PAC:30609470
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc THIOREDOX-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B00887 0.5kb upstream 0.5kb upstream 2063 true A02: 4171194-4173256 Brassica rapa FPsc
Brara.B00887 0.5kb upstream 0.5kb upstream 500 false A02: 4171194-4171693 Brassica rapa FPsc
Brara.B00887 0.5kb downstream 0.5kb downstream 2063 true A02: 4171694-4173756 Brassica rapa FPsc
Brara.B00887 0.5kb downstream 0.5kb downstream 500 false A02: 4173257-4173756 Brassica rapa FPsc
Brara.B00887 1.0kb upstream 1.0kb upstream 2563 true A02: 4170694-4173256 Brassica rapa FPsc
Brara.B00887 1.0kb upstream 1.0kb upstream 1000 false A02: 4170694-4171693 Brassica rapa FPsc
Brara.B00887 1.0kb downstream 1.0kb downstream 2563 true A02: 4171694-4174256 Brassica rapa FPsc
Brara.B00887 1.0kb downstream 1.0kb downstream 1000 false A02: 4173257-4174256 Brassica rapa FPsc
Brara.B00887 2.0kb upstream 2.0kb upstream 3563 true A02: 4169694-4173256 Brassica rapa FPsc
Brara.B00887 2.0kb upstream 2.0kb upstream 2000 false A02: 4169694-4171693 Brassica rapa FPsc
Brara.B00887 2.0kb downstream 2.0kb downstream 3563 true A02: 4171694-4175256 Brassica rapa FPsc
Brara.B00887 2.0kb downstream 2.0kb downstream 2000 false A02: 4173257-4175256 Brassica rapa FPsc
Brara.B00887 5.0kb upstream 5.0kb upstream 6563 true A02: 4166694-4173256 Brassica rapa FPsc
Brara.B00887 5.0kb upstream 5.0kb upstream 5000 false A02: 4166694-4171693 Brassica rapa FPsc
Brara.B00887 5.0kb downstream 5.0kb downstream 6563 true A02: 4171694-4178256 Brassica rapa FPsc
Brara.B00887 5.0kb downstream 5.0kb downstream 5000 false A02: 4173257-4178256 Brassica rapa FPsc
Brara.B00887 10.0kb upstream 10.0kb upstream 11563 true A02: 4161694-4173256 Brassica rapa FPsc
Brara.B00887 10.0kb upstream 10.0kb upstream 10000 false A02: 4161694-4171693 Brassica rapa FPsc
Brara.B00887 10.0kb downstream 10.0kb downstream 11563 true A02: 4171694-4183256 Brassica rapa FPsc
Brara.B00887 10.0kb downstream 10.0kb downstream 10000 false A02: 4173257-4183256 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364139 5261 Brassicaceae View MSA
123830349 5264 Brassicales-Malvales View MSA
124321666 5266 SBM View MSA
124251617 5268 Malvidae View MSA
124064046 5270 Rosid View MSA
123741506 5271 Pentapetalae View MSA
122793687 5272 Eudicot View MSA
122043796 5273 Angiosperm View MSA
121344746 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier