Gene : Brara.B00942 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR10992:SF731 - HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN Genomic Order:  942
Name:  ? Brara.B00942 Secondary Identifier:  ? PAC:30608169
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc LIPAS-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B00942 0.5kb upstream 0.5kb upstream 3481 true A02: 4476446-4479926 Brassica rapa FPsc
Brara.B00942 0.5kb upstream 0.5kb upstream 500 false A02: 4479427-4479926 Brassica rapa FPsc
Brara.B00942 0.5kb downstream 0.5kb downstream 3481 true A02: 4475946-4479426 Brassica rapa FPsc
Brara.B00942 0.5kb downstream 0.5kb downstream 500 false A02: 4475946-4476445 Brassica rapa FPsc
Brara.B00942 1.0kb upstream 1.0kb upstream 3981 true A02: 4476446-4480426 Brassica rapa FPsc
Brara.B00942 1.0kb upstream 1.0kb upstream 1000 false A02: 4479427-4480426 Brassica rapa FPsc
Brara.B00942 1.0kb downstream 1.0kb downstream 3981 true A02: 4475446-4479426 Brassica rapa FPsc
Brara.B00942 1.0kb downstream 1.0kb downstream 1000 false A02: 4475446-4476445 Brassica rapa FPsc
Brara.B00942 2.0kb upstream 2.0kb upstream 4981 true A02: 4476446-4481426 Brassica rapa FPsc
Brara.B00942 2.0kb upstream 2.0kb upstream 2000 false A02: 4479427-4481426 Brassica rapa FPsc
Brara.B00942 2.0kb downstream 2.0kb downstream 4981 true A02: 4474446-4479426 Brassica rapa FPsc
Brara.B00942 2.0kb downstream 2.0kb downstream 2000 false A02: 4474446-4476445 Brassica rapa FPsc
Brara.B00942 5.0kb upstream 5.0kb upstream 7981 true A02: 4476446-4484426 Brassica rapa FPsc
Brara.B00942 5.0kb upstream 5.0kb upstream 5000 false A02: 4479427-4484426 Brassica rapa FPsc
Brara.B00942 5.0kb downstream 5.0kb downstream 7981 true A02: 4471446-4479426 Brassica rapa FPsc
Brara.B00942 5.0kb downstream 5.0kb downstream 5000 false A02: 4471446-4476445 Brassica rapa FPsc
Brara.B00942 10.0kb upstream 10.0kb upstream 12981 true A02: 4476446-4489426 Brassica rapa FPsc
Brara.B00942 10.0kb upstream 10.0kb upstream 10000 false A02: 4479427-4489426 Brassica rapa FPsc
Brara.B00942 10.0kb downstream 10.0kb downstream 12981 true A02: 4466446-4479426 Brassica rapa FPsc
Brara.B00942 10.0kb downstream 10.0kb downstream 10000 false A02: 4466446-4476445 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370391 5261 Brassicaceae View MSA
123799955 5264 Brassicales-Malvales View MSA
124347043 5266 SBM View MSA
124243316 5268 Malvidae View MSA
124060588 5270 Rosid View MSA
123737502 5271 Pentapetalae View MSA
122795240 5272 Eudicot View MSA
122044189 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121351643 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier