Gene : Brara.E00393 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR14217:SF1 - INOSITOL-TETRAKISPHOSPHATE 1-KINASE Genomic Order:  393
Name:  ? Brara.E00393 Secondary Identifier:  ? PAC:30627140
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6365 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6366 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6554 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E00393 0.5kb upstream 0.5kb upstream 3349 true A05: 2124362-2127710 Brassica rapa FPsc
Brara.E00393 0.5kb upstream 0.5kb upstream 500 false A05: 2127211-2127710 Brassica rapa FPsc
Brara.E00393 0.5kb downstream 0.5kb downstream 3349 true A05: 2123862-2127210 Brassica rapa FPsc
Brara.E00393 0.5kb downstream 0.5kb downstream 500 false A05: 2123862-2124361 Brassica rapa FPsc
Brara.E00393 1.0kb upstream 1.0kb upstream 3849 true A05: 2124362-2128210 Brassica rapa FPsc
Brara.E00393 1.0kb upstream 1.0kb upstream 1000 false A05: 2127211-2128210 Brassica rapa FPsc
Brara.E00393 1.0kb downstream 1.0kb downstream 3849 true A05: 2123362-2127210 Brassica rapa FPsc
Brara.E00393 1.0kb downstream 1.0kb downstream 1000 false A05: 2123362-2124361 Brassica rapa FPsc
Brara.E00393 2.0kb upstream 2.0kb upstream 4849 true A05: 2124362-2129210 Brassica rapa FPsc
Brara.E00393 2.0kb upstream 2.0kb upstream 2000 false A05: 2127211-2129210 Brassica rapa FPsc
Brara.E00393 2.0kb downstream 2.0kb downstream 4849 true A05: 2122362-2127210 Brassica rapa FPsc
Brara.E00393 2.0kb downstream 2.0kb downstream 2000 false A05: 2122362-2124361 Brassica rapa FPsc
Brara.E00393 5.0kb upstream 5.0kb upstream 7849 true A05: 2124362-2132210 Brassica rapa FPsc
Brara.E00393 5.0kb upstream 5.0kb upstream 5000 false A05: 2127211-2132210 Brassica rapa FPsc
Brara.E00393 5.0kb downstream 5.0kb downstream 7849 true A05: 2119362-2127210 Brassica rapa FPsc
Brara.E00393 5.0kb downstream 5.0kb downstream 5000 false A05: 2119362-2124361 Brassica rapa FPsc
Brara.E00393 10.0kb upstream 10.0kb upstream 12849 true A05: 2124362-2137210 Brassica rapa FPsc
Brara.E00393 10.0kb upstream 10.0kb upstream 10000 false A05: 2127211-2137210 Brassica rapa FPsc
Brara.E00393 10.0kb downstream 10.0kb downstream 12849 true A05: 2114362-2127210 Brassica rapa FPsc
Brara.E00393 10.0kb downstream 10.0kb downstream 10000 false A05: 2114362-2124361 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369178 5261 Brassicaceae View MSA
123831358 5264 Brassicales-Malvales View MSA
124343367 5266 SBM View MSA
124239106 5268 Malvidae View MSA
124062459 5270 Rosid View MSA
123738730 5271 Pentapetalae View MSA
122785749 5272 Eudicot View MSA
122045503 5273 Angiosperm View MSA
121345915 5274 Embryophyte View MSA
123428316 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier