Gene : Brara.E00405 B. rapa FPsc v1.3
Defline:  (1 of 3) KOG1081 - Transcription factor NSD1 and related SET domain proteins Genomic Order:  405
Name:  ? Brara.E00405 Secondary Identifier:  ? PAC:30624824
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E00405 0.5kb upstream 0.5kb upstream 3245 true A05: 2161612-2164856 Brassica rapa FPsc
Brara.E00405 0.5kb upstream 0.5kb upstream 500 false A05: 2161612-2162111 Brassica rapa FPsc
Brara.E00405 0.5kb downstream 0.5kb downstream 3245 true A05: 2162112-2165356 Brassica rapa FPsc
Brara.E00405 0.5kb downstream 0.5kb downstream 500 false A05: 2164857-2165356 Brassica rapa FPsc
Brara.E00405 1.0kb upstream 1.0kb upstream 3745 true A05: 2161112-2164856 Brassica rapa FPsc
Brara.E00405 1.0kb upstream 1.0kb upstream 1000 false A05: 2161112-2162111 Brassica rapa FPsc
Brara.E00405 1.0kb downstream 1.0kb downstream 3745 true A05: 2162112-2165856 Brassica rapa FPsc
Brara.E00405 1.0kb downstream 1.0kb downstream 1000 false A05: 2164857-2165856 Brassica rapa FPsc
Brara.E00405 2.0kb upstream 2.0kb upstream 4745 true A05: 2160112-2164856 Brassica rapa FPsc
Brara.E00405 2.0kb upstream 2.0kb upstream 2000 false A05: 2160112-2162111 Brassica rapa FPsc
Brara.E00405 2.0kb downstream 2.0kb downstream 4745 true A05: 2162112-2166856 Brassica rapa FPsc
Brara.E00405 2.0kb downstream 2.0kb downstream 2000 false A05: 2164857-2166856 Brassica rapa FPsc
Brara.E00405 5.0kb upstream 5.0kb upstream 7745 true A05: 2157112-2164856 Brassica rapa FPsc
Brara.E00405 5.0kb upstream 5.0kb upstream 5000 false A05: 2157112-2162111 Brassica rapa FPsc
Brara.E00405 5.0kb downstream 5.0kb downstream 7745 true A05: 2162112-2169856 Brassica rapa FPsc
Brara.E00405 5.0kb downstream 5.0kb downstream 5000 false A05: 2164857-2169856 Brassica rapa FPsc
Brara.E00405 10.0kb upstream 10.0kb upstream 12745 true A05: 2152112-2164856 Brassica rapa FPsc
Brara.E00405 10.0kb upstream 10.0kb upstream 10000 false A05: 2152112-2162111 Brassica rapa FPsc
Brara.E00405 10.0kb downstream 10.0kb downstream 12745 true A05: 2162112-2174856 Brassica rapa FPsc
Brara.E00405 10.0kb downstream 10.0kb downstream 10000 false A05: 2164857-2174856 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373498 5261 Brassicaceae View MSA
123835836 5264 Brassicales-Malvales View MSA
124340334 5266 SBM View MSA
124245007 5268 Malvidae View MSA
124064524 5270 Rosid View MSA
123751966 5271 Pentapetalae View MSA
122790455 5272 Eudicot View MSA
122049912 5273 Angiosperm View MSA
123428946 5275 Viridiplantae View MSA
121350319 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier