Gene : Brara.E00406 B. rapa FPsc v1.3
Defline:  (1 of 4) 1.5.1.20 - Methylenetetrahydrofolate reductase (NAD(P)H) / N(5,10)-methylenetetrahydrofolate reductase Genomic Order:  406
Name:  ? Brara.E00406 Secondary Identifier:  ? PAC:30624833
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-3841 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E00406 0.5kb upstream 0.5kb upstream 3441 true A05: 2164578-2168018 Brassica rapa FPsc
Brara.E00406 0.5kb upstream 0.5kb upstream 500 false A05: 2164578-2165077 Brassica rapa FPsc
Brara.E00406 0.5kb downstream 0.5kb downstream 3441 true A05: 2165078-2168518 Brassica rapa FPsc
Brara.E00406 0.5kb downstream 0.5kb downstream 500 false A05: 2168019-2168518 Brassica rapa FPsc
Brara.E00406 1.0kb upstream 1.0kb upstream 3941 true A05: 2164078-2168018 Brassica rapa FPsc
Brara.E00406 1.0kb upstream 1.0kb upstream 1000 false A05: 2164078-2165077 Brassica rapa FPsc
Brara.E00406 1.0kb downstream 1.0kb downstream 3941 true A05: 2165078-2169018 Brassica rapa FPsc
Brara.E00406 1.0kb downstream 1.0kb downstream 1000 false A05: 2168019-2169018 Brassica rapa FPsc
Brara.E00406 2.0kb upstream 2.0kb upstream 4941 true A05: 2163078-2168018 Brassica rapa FPsc
Brara.E00406 2.0kb upstream 2.0kb upstream 2000 false A05: 2163078-2165077 Brassica rapa FPsc
Brara.E00406 2.0kb downstream 2.0kb downstream 4941 true A05: 2165078-2170018 Brassica rapa FPsc
Brara.E00406 2.0kb downstream 2.0kb downstream 2000 false A05: 2168019-2170018 Brassica rapa FPsc
Brara.E00406 5.0kb upstream 5.0kb upstream 7941 true A05: 2160078-2168018 Brassica rapa FPsc
Brara.E00406 5.0kb upstream 5.0kb upstream 5000 false A05: 2160078-2165077 Brassica rapa FPsc
Brara.E00406 5.0kb downstream 5.0kb downstream 7941 true A05: 2165078-2173018 Brassica rapa FPsc
Brara.E00406 5.0kb downstream 5.0kb downstream 5000 false A05: 2168019-2173018 Brassica rapa FPsc
Brara.E00406 10.0kb upstream 10.0kb upstream 12941 true A05: 2155078-2168018 Brassica rapa FPsc
Brara.E00406 10.0kb upstream 10.0kb upstream 10000 false A05: 2155078-2165077 Brassica rapa FPsc
Brara.E00406 10.0kb downstream 10.0kb downstream 12941 true A05: 2165078-2178018 Brassica rapa FPsc
Brara.E00406 10.0kb downstream 10.0kb downstream 10000 false A05: 2168019-2178018 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026878 5273 Angiosperm View MSA
122363874 5261 Brassicaceae View MSA
123840273 5264 Brassicales-Malvales View MSA
124345864 5266 SBM View MSA
124250713 5268 Malvidae View MSA
124060505 5270 Rosid View MSA
123747521 5271 Pentapetalae View MSA
122785990 5272 Eudicot View MSA
121343836 5274 Embryophyte View MSA
123425603 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier