Gene : Brara.B01825 B. rapa FPsc v1.3
Defline:  (1 of 1) 2.2.1.9 - 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase / SEPHCHC synthase Genomic Order:  1825
Name:  ? Brara.B01825 Secondary Identifier:  ? PAC:30608210
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5837 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B01825 0.5kb upstream 0.5kb upstream 9858 true A02: 10873180-10883037 Brassica rapa FPsc
Brara.B01825 0.5kb upstream 0.5kb upstream 500 false A02: 10873180-10873679 Brassica rapa FPsc
Brara.B01825 0.5kb downstream 0.5kb downstream 9858 true A02: 10873680-10883537 Brassica rapa FPsc
Brara.B01825 0.5kb downstream 0.5kb downstream 500 false A02: 10883038-10883537 Brassica rapa FPsc
Brara.B01825 1.0kb upstream 1.0kb upstream 10358 true A02: 10872680-10883037 Brassica rapa FPsc
Brara.B01825 1.0kb upstream 1.0kb upstream 1000 false A02: 10872680-10873679 Brassica rapa FPsc
Brara.B01825 1.0kb downstream 1.0kb downstream 10358 true A02: 10873680-10884037 Brassica rapa FPsc
Brara.B01825 1.0kb downstream 1.0kb downstream 1000 false A02: 10883038-10884037 Brassica rapa FPsc
Brara.B01825 2.0kb upstream 2.0kb upstream 11358 true A02: 10871680-10883037 Brassica rapa FPsc
Brara.B01825 2.0kb upstream 2.0kb upstream 2000 false A02: 10871680-10873679 Brassica rapa FPsc
Brara.B01825 2.0kb downstream 2.0kb downstream 11358 true A02: 10873680-10885037 Brassica rapa FPsc
Brara.B01825 2.0kb downstream 2.0kb downstream 2000 false A02: 10883038-10885037 Brassica rapa FPsc
Brara.B01825 5.0kb upstream 5.0kb upstream 14358 true A02: 10868680-10883037 Brassica rapa FPsc
Brara.B01825 5.0kb upstream 5.0kb upstream 5000 false A02: 10868680-10873679 Brassica rapa FPsc
Brara.B01825 5.0kb downstream 5.0kb downstream 14358 true A02: 10873680-10888037 Brassica rapa FPsc
Brara.B01825 5.0kb downstream 5.0kb downstream 5000 false A02: 10883038-10888037 Brassica rapa FPsc
Brara.B01825 10.0kb upstream 10.0kb upstream 19358 true A02: 10863680-10883037 Brassica rapa FPsc
Brara.B01825 10.0kb upstream 10.0kb upstream 10000 false A02: 10863680-10873679 Brassica rapa FPsc
Brara.B01825 10.0kb downstream 10.0kb downstream 19358 true A02: 10873680-10893037 Brassica rapa FPsc
Brara.B01825 10.0kb downstream 10.0kb downstream 10000 false A02: 10883038-10893037 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361603 5261 Brassicaceae View MSA
123828356 5264 Brassicales-Malvales View MSA
124342017 5266 SBM View MSA
124252749 5268 Malvidae View MSA
124050387 5270 Rosid View MSA
123744882 5271 Pentapetalae View MSA
122788106 5272 Eudicot View MSA
122043367 5273 Angiosperm View MSA
121345465 5274 Embryophyte View MSA
123425711 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier