Gene : Brara.H03006 B. rapa FPsc v1.3
Defline:  (1 of 122) 1.11.1.7 - Peroxidase / Lactoperoxidase Genomic Order:  3006
Name:  ? Brara.H03006 Secondary Identifier:  ? PAC:30647013
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5466 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7214 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7445 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H03006 0.5kb upstream 0.5kb upstream 1972 true A08: 22681942-22683913 Brassica rapa FPsc
Brara.H03006 0.5kb upstream 0.5kb upstream 500 false A08: 22681942-22682441 Brassica rapa FPsc
Brara.H03006 0.5kb downstream 0.5kb downstream 1972 true A08: 22682442-22684413 Brassica rapa FPsc
Brara.H03006 0.5kb downstream 0.5kb downstream 500 false A08: 22683914-22684413 Brassica rapa FPsc
Brara.H03006 1.0kb upstream 1.0kb upstream 2472 true A08: 22681442-22683913 Brassica rapa FPsc
Brara.H03006 1.0kb upstream 1.0kb upstream 1000 false A08: 22681442-22682441 Brassica rapa FPsc
Brara.H03006 1.0kb downstream 1.0kb downstream 2472 true A08: 22682442-22684913 Brassica rapa FPsc
Brara.H03006 1.0kb downstream 1.0kb downstream 1000 false A08: 22683914-22684913 Brassica rapa FPsc
Brara.H03006 2.0kb upstream 2.0kb upstream 3472 true A08: 22680442-22683913 Brassica rapa FPsc
Brara.H03006 2.0kb upstream 2.0kb upstream 2000 false A08: 22680442-22682441 Brassica rapa FPsc
Brara.H03006 2.0kb downstream 2.0kb downstream 3472 true A08: 22682442-22685913 Brassica rapa FPsc
Brara.H03006 2.0kb downstream 2.0kb downstream 2000 false A08: 22683914-22685913 Brassica rapa FPsc
Brara.H03006 5.0kb upstream 5.0kb upstream 6472 true A08: 22677442-22683913 Brassica rapa FPsc
Brara.H03006 5.0kb upstream 5.0kb upstream 5000 false A08: 22677442-22682441 Brassica rapa FPsc
Brara.H03006 5.0kb downstream 5.0kb downstream 6472 true A08: 22682442-22688913 Brassica rapa FPsc
Brara.H03006 5.0kb downstream 5.0kb downstream 5000 false A08: 22683914-22688913 Brassica rapa FPsc
Brara.H03006 10.0kb upstream 10.0kb upstream 11472 true A08: 22672442-22683913 Brassica rapa FPsc
Brara.H03006 10.0kb upstream 10.0kb upstream 10000 false A08: 22672442-22682441 Brassica rapa FPsc
Brara.H03006 10.0kb downstream 10.0kb downstream 11472 true A08: 22682442-22693913 Brassica rapa FPsc
Brara.H03006 10.0kb downstream 10.0kb downstream 10000 false A08: 22683914-22693913 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377741 5261 Brassicaceae View MSA
123841316 5264 Brassicales-Malvales View MSA
124340691 5266 SBM View MSA
124241136 5268 Malvidae View MSA
124071148 5270 Rosid View MSA
123748177 5271 Pentapetalae View MSA
122794454 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier