Gene : Brara.B01864 B. rapa FPsc v1.3
Defline:  (1 of 3) 6.3.5.5 - Carbamoyl-phosphate synthase (glutamine-hydrolyzing) / Glutamine-dependent carbamyl phosphate synthetase Genomic Order:  1864
Name:  ? Brara.B01864 Secondary Identifier:  ? PAC:30609901
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ARGSYNBSUB-PWY Brassica rapa FPsc pathologic  
BrapaFPsc ARGSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc CITRULBIO-PWY Brassica rapa FPsc pathologic  
BrapaFPsc GLUTAMINDEG-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY0-162 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-4984 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5686 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7211 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B01864 0.5kb upstream 0.5kb upstream 2672 true A02: 11179136-11181807 Brassica rapa FPsc
Brara.B01864 0.5kb upstream 0.5kb upstream 500 false A02: 11179136-11179635 Brassica rapa FPsc
Brara.B01864 0.5kb downstream 0.5kb downstream 2672 true A02: 11179636-11182307 Brassica rapa FPsc
Brara.B01864 0.5kb downstream 0.5kb downstream 500 false A02: 11181808-11182307 Brassica rapa FPsc
Brara.B01864 1.0kb upstream 1.0kb upstream 3172 true A02: 11178636-11181807 Brassica rapa FPsc
Brara.B01864 1.0kb upstream 1.0kb upstream 1000 false A02: 11178636-11179635 Brassica rapa FPsc
Brara.B01864 1.0kb downstream 1.0kb downstream 3172 true A02: 11179636-11182807 Brassica rapa FPsc
Brara.B01864 1.0kb downstream 1.0kb downstream 1000 false A02: 11181808-11182807 Brassica rapa FPsc
Brara.B01864 2.0kb upstream 2.0kb upstream 4172 true A02: 11177636-11181807 Brassica rapa FPsc
Brara.B01864 2.0kb upstream 2.0kb upstream 2000 false A02: 11177636-11179635 Brassica rapa FPsc
Brara.B01864 2.0kb downstream 2.0kb downstream 4172 true A02: 11179636-11183807 Brassica rapa FPsc
Brara.B01864 2.0kb downstream 2.0kb downstream 2000 false A02: 11181808-11183807 Brassica rapa FPsc
Brara.B01864 5.0kb upstream 5.0kb upstream 7172 true A02: 11174636-11181807 Brassica rapa FPsc
Brara.B01864 5.0kb upstream 5.0kb upstream 5000 false A02: 11174636-11179635 Brassica rapa FPsc
Brara.B01864 5.0kb downstream 5.0kb downstream 7172 true A02: 11179636-11186807 Brassica rapa FPsc
Brara.B01864 5.0kb downstream 5.0kb downstream 5000 false A02: 11181808-11186807 Brassica rapa FPsc
Brara.B01864 10.0kb upstream 10.0kb upstream 12172 true A02: 11169636-11181807 Brassica rapa FPsc
Brara.B01864 10.0kb upstream 10.0kb upstream 10000 false A02: 11169636-11179635 Brassica rapa FPsc
Brara.B01864 10.0kb downstream 10.0kb downstream 12172 true A02: 11179636-11191807 Brassica rapa FPsc
Brara.B01864 10.0kb downstream 10.0kb downstream 10000 false A02: 11181808-11191807 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122345444 5261 Brassicaceae Singleton cluster - no MSA
123839532 5264 Brassicales-Malvales View MSA
124338612 5266 SBM View MSA
124252256 5268 Malvidae View MSA
124069141 5270 Rosid View MSA
123739104 5271 Pentapetalae View MSA
122788005 5272 Eudicot View MSA
122046797 5273 Angiosperm View MSA
121347244 5274 Embryophyte View MSA
123423822 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier