Gene : Brara.B01632 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR10742:SF228 - POLYAMINE OXIDASE 4-RELATED Genomic Order:  1632
Name:  ? Brara.B01632 Secondary Identifier:  ? PAC:30607226
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6441 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B01632 0.5kb upstream 0.5kb upstream 3645 true A02: 9226047-9229691 Brassica rapa FPsc
Brara.B01632 0.5kb upstream 0.5kb upstream 500 false A02: 9226047-9226546 Brassica rapa FPsc
Brara.B01632 0.5kb downstream 0.5kb downstream 3645 true A02: 9226547-9230191 Brassica rapa FPsc
Brara.B01632 0.5kb downstream 0.5kb downstream 500 false A02: 9229692-9230191 Brassica rapa FPsc
Brara.B01632 1.0kb upstream 1.0kb upstream 4145 true A02: 9225547-9229691 Brassica rapa FPsc
Brara.B01632 1.0kb upstream 1.0kb upstream 1000 false A02: 9225547-9226546 Brassica rapa FPsc
Brara.B01632 1.0kb downstream 1.0kb downstream 4145 true A02: 9226547-9230691 Brassica rapa FPsc
Brara.B01632 1.0kb downstream 1.0kb downstream 1000 false A02: 9229692-9230691 Brassica rapa FPsc
Brara.B01632 2.0kb upstream 2.0kb upstream 5145 true A02: 9224547-9229691 Brassica rapa FPsc
Brara.B01632 2.0kb upstream 2.0kb upstream 2000 false A02: 9224547-9226546 Brassica rapa FPsc
Brara.B01632 2.0kb downstream 2.0kb downstream 5145 true A02: 9226547-9231691 Brassica rapa FPsc
Brara.B01632 2.0kb downstream 2.0kb downstream 2000 false A02: 9229692-9231691 Brassica rapa FPsc
Brara.B01632 5.0kb upstream 5.0kb upstream 8145 true A02: 9221547-9229691 Brassica rapa FPsc
Brara.B01632 5.0kb upstream 5.0kb upstream 5000 false A02: 9221547-9226546 Brassica rapa FPsc
Brara.B01632 5.0kb downstream 5.0kb downstream 8145 true A02: 9226547-9234691 Brassica rapa FPsc
Brara.B01632 5.0kb downstream 5.0kb downstream 5000 false A02: 9229692-9234691 Brassica rapa FPsc
Brara.B01632 10.0kb upstream 10.0kb upstream 13145 true A02: 9216547-9229691 Brassica rapa FPsc
Brara.B01632 10.0kb upstream 10.0kb upstream 10000 false A02: 9216547-9226546 Brassica rapa FPsc
Brara.B01632 10.0kb downstream 10.0kb downstream 13145 true A02: 9226547-9239691 Brassica rapa FPsc
Brara.B01632 10.0kb downstream 10.0kb downstream 10000 false A02: 9229692-9239691 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366027 5261 Brassicaceae View MSA
123835640 5264 Brassicales-Malvales View MSA
124336999 5266 SBM View MSA
124238146 5268 Malvidae View MSA
124061702 5270 Rosid View MSA
123740363 5271 Pentapetalae View MSA
122792459 5272 Eudicot View MSA
122049478 5273 Angiosperm View MSA
121311425 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier