Gene : Brara.H02823 B. rapa FPsc v1.3
Defline:  (1 of 1) KOG1254 - ATP-citrate lyase Genomic Order:  2823
Name:  ? Brara.H02823 Secondary Identifier:  ? PAC:30647398
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5172 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5173 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H02823 0.5kb upstream 0.5kb upstream 2985 true A08: 21985110-21988094 Brassica rapa FPsc
Brara.H02823 0.5kb upstream 0.5kb upstream 500 false A08: 21987595-21988094 Brassica rapa FPsc
Brara.H02823 0.5kb downstream 0.5kb downstream 2985 true A08: 21984610-21987594 Brassica rapa FPsc
Brara.H02823 0.5kb downstream 0.5kb downstream 500 false A08: 21984610-21985109 Brassica rapa FPsc
Brara.H02823 1.0kb upstream 1.0kb upstream 3485 true A08: 21985110-21988594 Brassica rapa FPsc
Brara.H02823 1.0kb upstream 1.0kb upstream 1000 false A08: 21987595-21988594 Brassica rapa FPsc
Brara.H02823 1.0kb downstream 1.0kb downstream 3485 true A08: 21984110-21987594 Brassica rapa FPsc
Brara.H02823 1.0kb downstream 1.0kb downstream 1000 false A08: 21984110-21985109 Brassica rapa FPsc
Brara.H02823 2.0kb upstream 2.0kb upstream 4485 true A08: 21985110-21989594 Brassica rapa FPsc
Brara.H02823 2.0kb upstream 2.0kb upstream 2000 false A08: 21987595-21989594 Brassica rapa FPsc
Brara.H02823 2.0kb downstream 2.0kb downstream 4485 true A08: 21983110-21987594 Brassica rapa FPsc
Brara.H02823 2.0kb downstream 2.0kb downstream 2000 false A08: 21983110-21985109 Brassica rapa FPsc
Brara.H02823 5.0kb upstream 5.0kb upstream 7485 true A08: 21985110-21992594 Brassica rapa FPsc
Brara.H02823 5.0kb upstream 5.0kb upstream 5000 false A08: 21987595-21992594 Brassica rapa FPsc
Brara.H02823 5.0kb downstream 5.0kb downstream 7485 true A08: 21980110-21987594 Brassica rapa FPsc
Brara.H02823 5.0kb downstream 5.0kb downstream 5000 false A08: 21980110-21985109 Brassica rapa FPsc
Brara.H02823 10.0kb upstream 10.0kb upstream 12485 true A08: 21985110-21997594 Brassica rapa FPsc
Brara.H02823 10.0kb upstream 10.0kb upstream 10000 false A08: 21987595-21997594 Brassica rapa FPsc
Brara.H02823 10.0kb downstream 10.0kb downstream 12485 true A08: 21975110-21987594 Brassica rapa FPsc
Brara.H02823 10.0kb downstream 10.0kb downstream 10000 false A08: 21975110-21985109 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376063 5261 Brassicaceae View MSA
123830903 5264 Brassicales-Malvales View MSA
124337063 5266 SBM View MSA
124245104 5268 Malvidae View MSA
124068086 5270 Rosid View MSA
123744939 5271 Pentapetalae View MSA
122786148 5272 Eudicot View MSA
122042565 5273 Angiosperm View MSA
121348583 5274 Embryophyte View MSA
123428169 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier