Gene : Brara.B01645 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR20852//PTHR20852:SF61 - GLUTAMINE SYNTHETASE Genomic Order:  1645
Name:  ? Brara.B01645 Secondary Identifier:  ? PAC:30609270
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc GLNSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3282 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-381 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6549 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6963 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6964 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B01645 0.5kb upstream 0.5kb upstream 3129 true A02: 9329649-9332777 Brassica rapa FPsc
Brara.B01645 0.5kb upstream 0.5kb upstream 500 false A02: 9332278-9332777 Brassica rapa FPsc
Brara.B01645 0.5kb downstream 0.5kb downstream 3129 true A02: 9329149-9332277 Brassica rapa FPsc
Brara.B01645 0.5kb downstream 0.5kb downstream 500 false A02: 9329149-9329648 Brassica rapa FPsc
Brara.B01645 1.0kb upstream 1.0kb upstream 3629 true A02: 9329649-9333277 Brassica rapa FPsc
Brara.B01645 1.0kb upstream 1.0kb upstream 1000 false A02: 9332278-9333277 Brassica rapa FPsc
Brara.B01645 1.0kb downstream 1.0kb downstream 3629 true A02: 9328649-9332277 Brassica rapa FPsc
Brara.B01645 1.0kb downstream 1.0kb downstream 1000 false A02: 9328649-9329648 Brassica rapa FPsc
Brara.B01645 2.0kb upstream 2.0kb upstream 4629 true A02: 9329649-9334277 Brassica rapa FPsc
Brara.B01645 2.0kb upstream 2.0kb upstream 2000 false A02: 9332278-9334277 Brassica rapa FPsc
Brara.B01645 2.0kb downstream 2.0kb downstream 4629 true A02: 9327649-9332277 Brassica rapa FPsc
Brara.B01645 2.0kb downstream 2.0kb downstream 2000 false A02: 9327649-9329648 Brassica rapa FPsc
Brara.B01645 5.0kb upstream 5.0kb upstream 7629 true A02: 9329649-9337277 Brassica rapa FPsc
Brara.B01645 5.0kb upstream 5.0kb upstream 5000 false A02: 9332278-9337277 Brassica rapa FPsc
Brara.B01645 5.0kb downstream 5.0kb downstream 7629 true A02: 9324649-9332277 Brassica rapa FPsc
Brara.B01645 5.0kb downstream 5.0kb downstream 5000 false A02: 9324649-9329648 Brassica rapa FPsc
Brara.B01645 10.0kb upstream 10.0kb upstream 12629 true A02: 9329649-9342277 Brassica rapa FPsc
Brara.B01645 10.0kb upstream 10.0kb upstream 10000 false A02: 9332278-9342277 Brassica rapa FPsc
Brara.B01645 10.0kb downstream 10.0kb downstream 12629 true A02: 9319649-9332277 Brassica rapa FPsc
Brara.B01645 10.0kb downstream 10.0kb downstream 10000 false A02: 9319649-9329648 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378986 5261 Brassicaceae View MSA
123841665 5264 Brassicales-Malvales View MSA
124350836 5266 SBM View MSA
124245417 5268 Malvidae View MSA
124072083 5270 Rosid View MSA
123746903 5271 Pentapetalae View MSA
122794697 5272 Eudicot View MSA
122048815 5273 Angiosperm View MSA
121347129 5274 Embryophyte View MSA
123428761 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier