Gene : Brara.E00343 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR12276:SF45 - CLATHRIN INTERACTOR 1 Genomic Order:  343
Name:  ? Brara.E00343 Secondary Identifier:  ? PAC:30623860
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E00343 0.5kb upstream 0.5kb upstream 5991 true A05: 1901114-1907104 Brassica rapa FPsc
Brara.E00343 0.5kb upstream 0.5kb upstream 500 false A05: 1901114-1901613 Brassica rapa FPsc
Brara.E00343 0.5kb downstream 0.5kb downstream 5991 true A05: 1901614-1907604 Brassica rapa FPsc
Brara.E00343 0.5kb downstream 0.5kb downstream 500 false A05: 1907105-1907604 Brassica rapa FPsc
Brara.E00343 1.0kb upstream 1.0kb upstream 6491 true A05: 1900614-1907104 Brassica rapa FPsc
Brara.E00343 1.0kb upstream 1.0kb upstream 1000 false A05: 1900614-1901613 Brassica rapa FPsc
Brara.E00343 1.0kb downstream 1.0kb downstream 6491 true A05: 1901614-1908104 Brassica rapa FPsc
Brara.E00343 1.0kb downstream 1.0kb downstream 1000 false A05: 1907105-1908104 Brassica rapa FPsc
Brara.E00343 2.0kb upstream 2.0kb upstream 7491 true A05: 1899614-1907104 Brassica rapa FPsc
Brara.E00343 2.0kb upstream 2.0kb upstream 2000 false A05: 1899614-1901613 Brassica rapa FPsc
Brara.E00343 2.0kb downstream 2.0kb downstream 7491 true A05: 1901614-1909104 Brassica rapa FPsc
Brara.E00343 2.0kb downstream 2.0kb downstream 2000 false A05: 1907105-1909104 Brassica rapa FPsc
Brara.E00343 5.0kb upstream 5.0kb upstream 10491 true A05: 1896614-1907104 Brassica rapa FPsc
Brara.E00343 5.0kb upstream 5.0kb upstream 5000 false A05: 1896614-1901613 Brassica rapa FPsc
Brara.E00343 5.0kb downstream 5.0kb downstream 10491 true A05: 1901614-1912104 Brassica rapa FPsc
Brara.E00343 5.0kb downstream 5.0kb downstream 5000 false A05: 1907105-1912104 Brassica rapa FPsc
Brara.E00343 10.0kb upstream 10.0kb upstream 15491 true A05: 1891614-1907104 Brassica rapa FPsc
Brara.E00343 10.0kb upstream 10.0kb upstream 10000 false A05: 1891614-1901613 Brassica rapa FPsc
Brara.E00343 10.0kb downstream 10.0kb downstream 15491 true A05: 1901614-1917104 Brassica rapa FPsc
Brara.E00343 10.0kb downstream 10.0kb downstream 10000 false A05: 1907105-1917104 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380673 5261 Brassicaceae View MSA
123836509 5264 Brassicales-Malvales View MSA
124341273 5266 SBM View MSA
124243432 5268 Malvidae View MSA
124061795 5270 Rosid View MSA
123746942 5271 Pentapetalae View MSA
122786067 5272 Eudicot View MSA
122043253 5273 Angiosperm View MSA
121347121 5274 Embryophyte View MSA
123428144 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier