Gene : Brara.B01696 B. rapa FPsc v1.3
Defline:  (1 of 7) 4.1.1.39 - Ribulose-bisphosphate carboxylase / RuBP carboxylase Genomic Order:  1696
Name:  ? Brara.B01696 Secondary Identifier:  ? PAC:30610946
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc CALVIN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PHOTOALL-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5723 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B01696 0.5kb upstream 0.5kb upstream 1525 true A02: 9825333-9826857 Brassica rapa FPsc
Brara.B01696 0.5kb upstream 0.5kb upstream 500 false A02: 9826358-9826857 Brassica rapa FPsc
Brara.B01696 0.5kb downstream 0.5kb downstream 1525 true A02: 9824833-9826357 Brassica rapa FPsc
Brara.B01696 0.5kb downstream 0.5kb downstream 500 false A02: 9824833-9825332 Brassica rapa FPsc
Brara.B01696 1.0kb upstream 1.0kb upstream 2025 true A02: 9825333-9827357 Brassica rapa FPsc
Brara.B01696 1.0kb upstream 1.0kb upstream 1000 false A02: 9826358-9827357 Brassica rapa FPsc
Brara.B01696 1.0kb downstream 1.0kb downstream 2025 true A02: 9824333-9826357 Brassica rapa FPsc
Brara.B01696 1.0kb downstream 1.0kb downstream 1000 false A02: 9824333-9825332 Brassica rapa FPsc
Brara.B01696 2.0kb upstream 2.0kb upstream 3025 true A02: 9825333-9828357 Brassica rapa FPsc
Brara.B01696 2.0kb upstream 2.0kb upstream 2000 false A02: 9826358-9828357 Brassica rapa FPsc
Brara.B01696 2.0kb downstream 2.0kb downstream 3025 true A02: 9823333-9826357 Brassica rapa FPsc
Brara.B01696 2.0kb downstream 2.0kb downstream 2000 false A02: 9823333-9825332 Brassica rapa FPsc
Brara.B01696 5.0kb upstream 5.0kb upstream 6025 true A02: 9825333-9831357 Brassica rapa FPsc
Brara.B01696 5.0kb upstream 5.0kb upstream 5000 false A02: 9826358-9831357 Brassica rapa FPsc
Brara.B01696 5.0kb downstream 5.0kb downstream 6025 true A02: 9820333-9826357 Brassica rapa FPsc
Brara.B01696 5.0kb downstream 5.0kb downstream 5000 false A02: 9820333-9825332 Brassica rapa FPsc
Brara.B01696 10.0kb upstream 10.0kb upstream 11025 true A02: 9825333-9836357 Brassica rapa FPsc
Brara.B01696 10.0kb upstream 10.0kb upstream 10000 false A02: 9826358-9836357 Brassica rapa FPsc
Brara.B01696 10.0kb downstream 10.0kb downstream 11025 true A02: 9815333-9826357 Brassica rapa FPsc
Brara.B01696 10.0kb downstream 10.0kb downstream 10000 false A02: 9815333-9825332 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380509 5261 Brassicaceae View MSA
123836682 5264 Brassicales-Malvales View MSA
124340616 5266 SBM View MSA
124250367 5268 Malvidae View MSA
124066802 5270 Rosid View MSA
123747186 5271 Pentapetalae View MSA
122796864 5272 Eudicot View MSA
122046951 5273 Angiosperm View MSA
121348432 5274 Embryophyte View MSA
123426346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier