Gene : Brara.B01686 B. rapa FPsc v1.3
Defline:  (1 of 4) PF00069//PF13947//PF14380 - Protein kinase domain (Pkinase) // Wall-associated receptor kinase galacturonan-binding (GUB_WAK_bind) // Wall-associated receptor kinase C-terminal (WAK_assoc) Genomic Order:  1686
Name:  ? Brara.B01686 Secondary Identifier:  ? PAC:30606831
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7409 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B01686 0.5kb upstream 0.5kb upstream 8629 true A02: 9712741-9721369 Brassica rapa FPsc
Brara.B01686 0.5kb upstream 0.5kb upstream 500 false A02: 9720870-9721369 Brassica rapa FPsc
Brara.B01686 0.5kb downstream 0.5kb downstream 8629 true A02: 9712241-9720869 Brassica rapa FPsc
Brara.B01686 0.5kb downstream 0.5kb downstream 500 false A02: 9712241-9712740 Brassica rapa FPsc
Brara.B01686 1.0kb upstream 1.0kb upstream 9129 true A02: 9712741-9721869 Brassica rapa FPsc
Brara.B01686 1.0kb upstream 1.0kb upstream 1000 false A02: 9720870-9721869 Brassica rapa FPsc
Brara.B01686 1.0kb downstream 1.0kb downstream 9129 true A02: 9711741-9720869 Brassica rapa FPsc
Brara.B01686 1.0kb downstream 1.0kb downstream 1000 false A02: 9711741-9712740 Brassica rapa FPsc
Brara.B01686 2.0kb upstream 2.0kb upstream 10129 true A02: 9712741-9722869 Brassica rapa FPsc
Brara.B01686 2.0kb upstream 2.0kb upstream 2000 false A02: 9720870-9722869 Brassica rapa FPsc
Brara.B01686 2.0kb downstream 2.0kb downstream 10129 true A02: 9710741-9720869 Brassica rapa FPsc
Brara.B01686 2.0kb downstream 2.0kb downstream 2000 false A02: 9710741-9712740 Brassica rapa FPsc
Brara.B01686 5.0kb upstream 5.0kb upstream 13129 true A02: 9712741-9725869 Brassica rapa FPsc
Brara.B01686 5.0kb upstream 5.0kb upstream 5000 false A02: 9720870-9725869 Brassica rapa FPsc
Brara.B01686 5.0kb downstream 5.0kb downstream 13129 true A02: 9707741-9720869 Brassica rapa FPsc
Brara.B01686 5.0kb downstream 5.0kb downstream 5000 false A02: 9707741-9712740 Brassica rapa FPsc
Brara.B01686 10.0kb upstream 10.0kb upstream 18129 true A02: 9712741-9730869 Brassica rapa FPsc
Brara.B01686 10.0kb upstream 10.0kb upstream 10000 false A02: 9720870-9730869 Brassica rapa FPsc
Brara.B01686 10.0kb downstream 10.0kb downstream 18129 true A02: 9702741-9720869 Brassica rapa FPsc
Brara.B01686 10.0kb downstream 10.0kb downstream 10000 false A02: 9702741-9712740 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380967 5261 Brassicaceae View MSA
123840146 5264 Brassicales-Malvales View MSA
124350842 5266 SBM View MSA
124254633 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier