Gene : Brara.H02684 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR21136//PTHR21136:SF89 - SNARE PROTEINS Genomic Order:  2684
Name:  ? Brara.H02684 Secondary Identifier:  ? PAC:30648579
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H02684 0.5kb upstream 0.5kb upstream 2281 true A08: 21406433-21408713 Brassica rapa FPsc
Brara.H02684 0.5kb upstream 0.5kb upstream 500 false A08: 21408214-21408713 Brassica rapa FPsc
Brara.H02684 0.5kb downstream 0.5kb downstream 2281 true A08: 21405933-21408213 Brassica rapa FPsc
Brara.H02684 0.5kb downstream 0.5kb downstream 500 false A08: 21405933-21406432 Brassica rapa FPsc
Brara.H02684 1.0kb upstream 1.0kb upstream 2781 true A08: 21406433-21409213 Brassica rapa FPsc
Brara.H02684 1.0kb upstream 1.0kb upstream 1000 false A08: 21408214-21409213 Brassica rapa FPsc
Brara.H02684 1.0kb downstream 1.0kb downstream 2781 true A08: 21405433-21408213 Brassica rapa FPsc
Brara.H02684 1.0kb downstream 1.0kb downstream 1000 false A08: 21405433-21406432 Brassica rapa FPsc
Brara.H02684 2.0kb upstream 2.0kb upstream 3781 true A08: 21406433-21410213 Brassica rapa FPsc
Brara.H02684 2.0kb upstream 2.0kb upstream 2000 false A08: 21408214-21410213 Brassica rapa FPsc
Brara.H02684 2.0kb downstream 2.0kb downstream 3781 true A08: 21404433-21408213 Brassica rapa FPsc
Brara.H02684 2.0kb downstream 2.0kb downstream 2000 false A08: 21404433-21406432 Brassica rapa FPsc
Brara.H02684 5.0kb upstream 5.0kb upstream 6781 true A08: 21406433-21413213 Brassica rapa FPsc
Brara.H02684 5.0kb upstream 5.0kb upstream 5000 false A08: 21408214-21413213 Brassica rapa FPsc
Brara.H02684 5.0kb downstream 5.0kb downstream 6781 true A08: 21401433-21408213 Brassica rapa FPsc
Brara.H02684 5.0kb downstream 5.0kb downstream 5000 false A08: 21401433-21406432 Brassica rapa FPsc
Brara.H02684 10.0kb upstream 10.0kb upstream 11781 true A08: 21406433-21418213 Brassica rapa FPsc
Brara.H02684 10.0kb upstream 10.0kb upstream 10000 false A08: 21408214-21418213 Brassica rapa FPsc
Brara.H02684 10.0kb downstream 10.0kb downstream 11781 true A08: 21396433-21408213 Brassica rapa FPsc
Brara.H02684 10.0kb downstream 10.0kb downstream 10000 false A08: 21396433-21406432 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375553 5261 Brassicaceae View MSA
123833989 5264 Brassicales-Malvales View MSA
124346272 5266 SBM View MSA
124254276 5268 Malvidae View MSA
124065843 5270 Rosid View MSA
123753791 5271 Pentapetalae View MSA
122788214 5272 Eudicot View MSA
122046474 5273 Angiosperm View MSA
121346313 5274 Embryophyte View MSA
123424515 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier