Gene : Brara.H02688 B. rapa FPsc v1.3
Defline:  (1 of 4) 2.1.2.10 - Aminomethyltransferase / Tetrahydrofolate aminomethyltransferase Genomic Order:  2688
Name:  ? Brara.H02688 Secondary Identifier:  ? PAC:30649340
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc GLYCLEAV-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H02688 0.5kb upstream 0.5kb upstream 2423 true A08: 21416873-21419295 Brassica rapa FPsc
Brara.H02688 0.5kb upstream 0.5kb upstream 500 false A08: 21418796-21419295 Brassica rapa FPsc
Brara.H02688 0.5kb downstream 0.5kb downstream 2423 true A08: 21416373-21418795 Brassica rapa FPsc
Brara.H02688 0.5kb downstream 0.5kb downstream 500 false A08: 21416373-21416872 Brassica rapa FPsc
Brara.H02688 1.0kb upstream 1.0kb upstream 2923 true A08: 21416873-21419795 Brassica rapa FPsc
Brara.H02688 1.0kb upstream 1.0kb upstream 1000 false A08: 21418796-21419795 Brassica rapa FPsc
Brara.H02688 1.0kb downstream 1.0kb downstream 2923 true A08: 21415873-21418795 Brassica rapa FPsc
Brara.H02688 1.0kb downstream 1.0kb downstream 1000 false A08: 21415873-21416872 Brassica rapa FPsc
Brara.H02688 2.0kb upstream 2.0kb upstream 3923 true A08: 21416873-21420795 Brassica rapa FPsc
Brara.H02688 2.0kb upstream 2.0kb upstream 2000 false A08: 21418796-21420795 Brassica rapa FPsc
Brara.H02688 2.0kb downstream 2.0kb downstream 3923 true A08: 21414873-21418795 Brassica rapa FPsc
Brara.H02688 2.0kb downstream 2.0kb downstream 2000 false A08: 21414873-21416872 Brassica rapa FPsc
Brara.H02688 5.0kb upstream 5.0kb upstream 6923 true A08: 21416873-21423795 Brassica rapa FPsc
Brara.H02688 5.0kb upstream 5.0kb upstream 5000 false A08: 21418796-21423795 Brassica rapa FPsc
Brara.H02688 5.0kb downstream 5.0kb downstream 6923 true A08: 21411873-21418795 Brassica rapa FPsc
Brara.H02688 5.0kb downstream 5.0kb downstream 5000 false A08: 21411873-21416872 Brassica rapa FPsc
Brara.H02688 10.0kb upstream 10.0kb upstream 11923 true A08: 21416873-21428795 Brassica rapa FPsc
Brara.H02688 10.0kb upstream 10.0kb upstream 10000 false A08: 21418796-21428795 Brassica rapa FPsc
Brara.H02688 10.0kb downstream 10.0kb downstream 11923 true A08: 21406873-21418795 Brassica rapa FPsc
Brara.H02688 10.0kb downstream 10.0kb downstream 10000 false A08: 21406873-21416872 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122355488 5261 Brassicaceae Singleton cluster - no MSA
123793727 5264 Brassicales-Malvales Singleton cluster - no MSA
124291557 5266 SBM Singleton cluster - no MSA
124251126 5268 Malvidae View MSA
124063348 5270 Rosid View MSA
123743205 5271 Pentapetalae View MSA
122791059 5272 Eudicot View MSA
122045036 5273 Angiosperm View MSA
121345728 5274 Embryophyte View MSA
123424844 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier