Gene : Brara.H02691 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR21022:SF4 - AROGENATE DEHYDRATASE/PREPHENATE DEHYDRATASE 1, CHLOROPLASTIC Genomic Order:  2691
Name:  ? Brara.H02691 Secondary Identifier:  ? PAC:30647445
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-3462 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3481 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H02691 0.5kb upstream 0.5kb upstream 3973 true A08: 21425538-21429510 Brassica rapa FPsc
Brara.H02691 0.5kb upstream 0.5kb upstream 500 false A08: 21429011-21429510 Brassica rapa FPsc
Brara.H02691 0.5kb downstream 0.5kb downstream 3973 true A08: 21425038-21429010 Brassica rapa FPsc
Brara.H02691 0.5kb downstream 0.5kb downstream 500 false A08: 21425038-21425537 Brassica rapa FPsc
Brara.H02691 1.0kb upstream 1.0kb upstream 4473 true A08: 21425538-21430010 Brassica rapa FPsc
Brara.H02691 1.0kb upstream 1.0kb upstream 1000 false A08: 21429011-21430010 Brassica rapa FPsc
Brara.H02691 1.0kb downstream 1.0kb downstream 4473 true A08: 21424538-21429010 Brassica rapa FPsc
Brara.H02691 1.0kb downstream 1.0kb downstream 1000 false A08: 21424538-21425537 Brassica rapa FPsc
Brara.H02691 2.0kb upstream 2.0kb upstream 5473 true A08: 21425538-21431010 Brassica rapa FPsc
Brara.H02691 2.0kb upstream 2.0kb upstream 2000 false A08: 21429011-21431010 Brassica rapa FPsc
Brara.H02691 2.0kb downstream 2.0kb downstream 5473 true A08: 21423538-21429010 Brassica rapa FPsc
Brara.H02691 2.0kb downstream 2.0kb downstream 2000 false A08: 21423538-21425537 Brassica rapa FPsc
Brara.H02691 5.0kb upstream 5.0kb upstream 8473 true A08: 21425538-21434010 Brassica rapa FPsc
Brara.H02691 5.0kb upstream 5.0kb upstream 5000 false A08: 21429011-21434010 Brassica rapa FPsc
Brara.H02691 5.0kb downstream 5.0kb downstream 8473 true A08: 21420538-21429010 Brassica rapa FPsc
Brara.H02691 5.0kb downstream 5.0kb downstream 5000 false A08: 21420538-21425537 Brassica rapa FPsc
Brara.H02691 10.0kb upstream 10.0kb upstream 13473 true A08: 21425538-21439010 Brassica rapa FPsc
Brara.H02691 10.0kb upstream 10.0kb upstream 10000 false A08: 21429011-21439010 Brassica rapa FPsc
Brara.H02691 10.0kb downstream 10.0kb downstream 13473 true A08: 21415538-21429010 Brassica rapa FPsc
Brara.H02691 10.0kb downstream 10.0kb downstream 10000 false A08: 21415538-21425537 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122354922 5261 Brassicaceae Singleton cluster - no MSA
123840992 5264 Brassicales-Malvales View MSA
124349569 5266 SBM View MSA
124243895 5268 Malvidae View MSA
124070926 5270 Rosid View MSA
123746635 5271 Pentapetalae View MSA
122795634 5272 Eudicot View MSA
122042719 5273 Angiosperm View MSA
121351398 5274 Embryophyte View MSA
123427097 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier