Gene : Brara.B01718 B. rapa FPsc v1.3
Defline:  (1 of 5) PF05755 - Rubber elongation factor protein (REF) (REF) Genomic Order:  1718
Name:  ? Brara.B01718 Secondary Identifier:  ? PAC:30608446
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B01718 0.5kb upstream 0.5kb upstream 1802 true A02: 10052014-10053815 Brassica rapa FPsc
Brara.B01718 0.5kb upstream 0.5kb upstream 500 false A02: 10053316-10053815 Brassica rapa FPsc
Brara.B01718 0.5kb downstream 0.5kb downstream 1802 true A02: 10051514-10053315 Brassica rapa FPsc
Brara.B01718 0.5kb downstream 0.5kb downstream 500 false A02: 10051514-10052013 Brassica rapa FPsc
Brara.B01718 1.0kb upstream 1.0kb upstream 2302 true A02: 10052014-10054315 Brassica rapa FPsc
Brara.B01718 1.0kb upstream 1.0kb upstream 1000 false A02: 10053316-10054315 Brassica rapa FPsc
Brara.B01718 1.0kb downstream 1.0kb downstream 2302 true A02: 10051014-10053315 Brassica rapa FPsc
Brara.B01718 1.0kb downstream 1.0kb downstream 1000 false A02: 10051014-10052013 Brassica rapa FPsc
Brara.B01718 2.0kb upstream 2.0kb upstream 3302 true A02: 10052014-10055315 Brassica rapa FPsc
Brara.B01718 2.0kb upstream 2.0kb upstream 2000 false A02: 10053316-10055315 Brassica rapa FPsc
Brara.B01718 2.0kb downstream 2.0kb downstream 3302 true A02: 10050014-10053315 Brassica rapa FPsc
Brara.B01718 2.0kb downstream 2.0kb downstream 2000 false A02: 10050014-10052013 Brassica rapa FPsc
Brara.B01718 5.0kb upstream 5.0kb upstream 6302 true A02: 10052014-10058315 Brassica rapa FPsc
Brara.B01718 5.0kb upstream 5.0kb upstream 5000 false A02: 10053316-10058315 Brassica rapa FPsc
Brara.B01718 5.0kb downstream 5.0kb downstream 6302 true A02: 10047014-10053315 Brassica rapa FPsc
Brara.B01718 5.0kb downstream 5.0kb downstream 5000 false A02: 10047014-10052013 Brassica rapa FPsc
Brara.B01718 10.0kb upstream 10.0kb upstream 11302 true A02: 10052014-10063315 Brassica rapa FPsc
Brara.B01718 10.0kb upstream 10.0kb upstream 10000 false A02: 10053316-10063315 Brassica rapa FPsc
Brara.B01718 10.0kb downstream 10.0kb downstream 11302 true A02: 10042014-10053315 Brassica rapa FPsc
Brara.B01718 10.0kb downstream 10.0kb downstream 10000 false A02: 10042014-10052013 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362420 5261 Brassicaceae View MSA
123838217 5264 Brassicales-Malvales View MSA
124342013 5266 SBM View MSA
124246485 5268 Malvidae View MSA
124068365 5270 Rosid View MSA
123736547 5271 Pentapetalae View MSA
122769867 5272 Eudicot View MSA
122050006 5273 Angiosperm View MSA
121311681 5274 Embryophyte View MSA
123348946 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier