Gene : Brara.E00369 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR12300:SF27 - HVA22-LIKE PROTEIN F Genomic Order:  369
Name:  ? Brara.E00369 Secondary Identifier:  ? PAC:30626464
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E00369 0.5kb upstream 0.5kb upstream 1262 true A05: 2025405-2026666 Brassica rapa FPsc
Brara.E00369 0.5kb upstream 0.5kb upstream 500 false A05: 2026167-2026666 Brassica rapa FPsc
Brara.E00369 0.5kb downstream 0.5kb downstream 1262 true A05: 2024905-2026166 Brassica rapa FPsc
Brara.E00369 0.5kb downstream 0.5kb downstream 500 false A05: 2024905-2025404 Brassica rapa FPsc
Brara.E00369 1.0kb upstream 1.0kb upstream 1762 true A05: 2025405-2027166 Brassica rapa FPsc
Brara.E00369 1.0kb upstream 1.0kb upstream 1000 false A05: 2026167-2027166 Brassica rapa FPsc
Brara.E00369 1.0kb downstream 1.0kb downstream 1762 true A05: 2024405-2026166 Brassica rapa FPsc
Brara.E00369 1.0kb downstream 1.0kb downstream 1000 false A05: 2024405-2025404 Brassica rapa FPsc
Brara.E00369 2.0kb upstream 2.0kb upstream 2762 true A05: 2025405-2028166 Brassica rapa FPsc
Brara.E00369 2.0kb upstream 2.0kb upstream 2000 false A05: 2026167-2028166 Brassica rapa FPsc
Brara.E00369 2.0kb downstream 2.0kb downstream 2762 true A05: 2023405-2026166 Brassica rapa FPsc
Brara.E00369 2.0kb downstream 2.0kb downstream 2000 false A05: 2023405-2025404 Brassica rapa FPsc
Brara.E00369 5.0kb upstream 5.0kb upstream 5762 true A05: 2025405-2031166 Brassica rapa FPsc
Brara.E00369 5.0kb upstream 5.0kb upstream 5000 false A05: 2026167-2031166 Brassica rapa FPsc
Brara.E00369 5.0kb downstream 5.0kb downstream 5762 true A05: 2020405-2026166 Brassica rapa FPsc
Brara.E00369 5.0kb downstream 5.0kb downstream 5000 false A05: 2020405-2025404 Brassica rapa FPsc
Brara.E00369 10.0kb upstream 10.0kb upstream 10762 true A05: 2025405-2036166 Brassica rapa FPsc
Brara.E00369 10.0kb upstream 10.0kb upstream 10000 false A05: 2026167-2036166 Brassica rapa FPsc
Brara.E00369 10.0kb downstream 10.0kb downstream 10762 true A05: 2015405-2026166 Brassica rapa FPsc
Brara.E00369 10.0kb downstream 10.0kb downstream 10000 false A05: 2015405-2025404 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122349802 5261 Brassicaceae Singleton cluster - no MSA
123840163 5264 Brassicales-Malvales View MSA
124343528 5266 SBM View MSA
124237128 5268 Malvidae View MSA
124064261 5270 Rosid View MSA
123742916 5271 Pentapetalae View MSA
122793296 5272 Eudicot View MSA
122047958 5273 Angiosperm View MSA
121349779 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier