Gene : Brara.H02567 B. rapa FPsc v1.3
Defline:  (1 of 6) 6.1.1.9 - Valine--tRNA ligase / Valyl-tRNA synthetase Genomic Order:  2567
Name:  ? Brara.H02567 Secondary Identifier:  ? PAC:30649804
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc TRNA-CHARGING-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H02567 0.5kb upstream 0.5kb upstream 5216 true A08: 20943007-20948222 Brassica rapa FPsc
Brara.H02567 0.5kb upstream 0.5kb upstream 500 false A08: 20943007-20943506 Brassica rapa FPsc
Brara.H02567 0.5kb downstream 0.5kb downstream 5216 true A08: 20943507-20948722 Brassica rapa FPsc
Brara.H02567 0.5kb downstream 0.5kb downstream 500 false A08: 20948223-20948722 Brassica rapa FPsc
Brara.H02567 1.0kb upstream 1.0kb upstream 5716 true A08: 20942507-20948222 Brassica rapa FPsc
Brara.H02567 1.0kb upstream 1.0kb upstream 1000 false A08: 20942507-20943506 Brassica rapa FPsc
Brara.H02567 1.0kb downstream 1.0kb downstream 5716 true A08: 20943507-20949222 Brassica rapa FPsc
Brara.H02567 1.0kb downstream 1.0kb downstream 1000 false A08: 20948223-20949222 Brassica rapa FPsc
Brara.H02567 2.0kb upstream 2.0kb upstream 6716 true A08: 20941507-20948222 Brassica rapa FPsc
Brara.H02567 2.0kb upstream 2.0kb upstream 2000 false A08: 20941507-20943506 Brassica rapa FPsc
Brara.H02567 2.0kb downstream 2.0kb downstream 6716 true A08: 20943507-20950222 Brassica rapa FPsc
Brara.H02567 2.0kb downstream 2.0kb downstream 2000 false A08: 20948223-20950222 Brassica rapa FPsc
Brara.H02567 5.0kb upstream 5.0kb upstream 9716 true A08: 20938507-20948222 Brassica rapa FPsc
Brara.H02567 5.0kb upstream 5.0kb upstream 5000 false A08: 20938507-20943506 Brassica rapa FPsc
Brara.H02567 5.0kb downstream 5.0kb downstream 9716 true A08: 20943507-20953222 Brassica rapa FPsc
Brara.H02567 5.0kb downstream 5.0kb downstream 5000 false A08: 20948223-20953222 Brassica rapa FPsc
Brara.H02567 10.0kb upstream 10.0kb upstream 14716 true A08: 20933507-20948222 Brassica rapa FPsc
Brara.H02567 10.0kb upstream 10.0kb upstream 10000 false A08: 20933507-20943506 Brassica rapa FPsc
Brara.H02567 10.0kb downstream 10.0kb downstream 14716 true A08: 20943507-20958222 Brassica rapa FPsc
Brara.H02567 10.0kb downstream 10.0kb downstream 10000 false A08: 20948223-20958222 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365312 5261 Brassicaceae View MSA
123827608 5264 Brassicales-Malvales View MSA
124350639 5266 SBM View MSA
124237752 5268 Malvidae View MSA
124066992 5270 Rosid View MSA
123752070 5271 Pentapetalae View MSA
122788218 5272 Eudicot View MSA
122045228 5273 Angiosperm View MSA
121348805 5274 Embryophyte View MSA
123424302 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier