Gene : Brara.H02580 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR10794:SF53 - CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN Genomic Order:  2580
Name:  ? Brara.H02580 Secondary Identifier:  ? PAC:30648885
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H02580 0.5kb upstream 0.5kb upstream 2504 true A08: 20987752-20990255 Brassica rapa FPsc
Brara.H02580 0.5kb upstream 0.5kb upstream 500 false A08: 20987752-20988251 Brassica rapa FPsc
Brara.H02580 0.5kb downstream 0.5kb downstream 2504 true A08: 20988252-20990755 Brassica rapa FPsc
Brara.H02580 0.5kb downstream 0.5kb downstream 500 false A08: 20990256-20990755 Brassica rapa FPsc
Brara.H02580 1.0kb upstream 1.0kb upstream 3004 true A08: 20987252-20990255 Brassica rapa FPsc
Brara.H02580 1.0kb upstream 1.0kb upstream 1000 false A08: 20987252-20988251 Brassica rapa FPsc
Brara.H02580 1.0kb downstream 1.0kb downstream 3004 true A08: 20988252-20991255 Brassica rapa FPsc
Brara.H02580 1.0kb downstream 1.0kb downstream 1000 false A08: 20990256-20991255 Brassica rapa FPsc
Brara.H02580 2.0kb upstream 2.0kb upstream 4004 true A08: 20986252-20990255 Brassica rapa FPsc
Brara.H02580 2.0kb upstream 2.0kb upstream 2000 false A08: 20986252-20988251 Brassica rapa FPsc
Brara.H02580 2.0kb downstream 2.0kb downstream 4004 true A08: 20988252-20992255 Brassica rapa FPsc
Brara.H02580 2.0kb downstream 2.0kb downstream 2000 false A08: 20990256-20992255 Brassica rapa FPsc
Brara.H02580 5.0kb upstream 5.0kb upstream 7004 true A08: 20983252-20990255 Brassica rapa FPsc
Brara.H02580 5.0kb upstream 5.0kb upstream 5000 false A08: 20983252-20988251 Brassica rapa FPsc
Brara.H02580 5.0kb downstream 5.0kb downstream 7004 true A08: 20988252-20995255 Brassica rapa FPsc
Brara.H02580 5.0kb downstream 5.0kb downstream 5000 false A08: 20990256-20995255 Brassica rapa FPsc
Brara.H02580 10.0kb upstream 10.0kb upstream 12004 true A08: 20978252-20990255 Brassica rapa FPsc
Brara.H02580 10.0kb upstream 10.0kb upstream 10000 false A08: 20978252-20988251 Brassica rapa FPsc
Brara.H02580 10.0kb downstream 10.0kb downstream 12004 true A08: 20988252-21000255 Brassica rapa FPsc
Brara.H02580 10.0kb downstream 10.0kb downstream 10000 false A08: 20990256-21000255 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122355362 5261 Brassicaceae Singleton cluster - no MSA
123793618 5264 Brassicales-Malvales Singleton cluster - no MSA
124291454 5266 SBM Singleton cluster - no MSA
124250577 5268 Malvidae View MSA
124063785 5270 Rosid View MSA
123740423 5271 Pentapetalae View MSA
122790684 5272 Eudicot View MSA
122042712 5273 Angiosperm View MSA
121349023 5274 Embryophyte View MSA
123428279 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier