Gene : Brara.H02609 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR12161:SF23 - REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN Genomic Order:  2609
Name:  ? Brara.H02609 Secondary Identifier:  ? PAC:30649240
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H02609 0.5kb upstream 0.5kb upstream 2093 true A08: 21085059-21087151 Brassica rapa FPsc
Brara.H02609 0.5kb upstream 0.5kb upstream 500 false A08: 21085059-21085558 Brassica rapa FPsc
Brara.H02609 0.5kb downstream 0.5kb downstream 2093 true A08: 21085559-21087651 Brassica rapa FPsc
Brara.H02609 0.5kb downstream 0.5kb downstream 500 false A08: 21087152-21087651 Brassica rapa FPsc
Brara.H02609 1.0kb upstream 1.0kb upstream 2593 true A08: 21084559-21087151 Brassica rapa FPsc
Brara.H02609 1.0kb upstream 1.0kb upstream 1000 false A08: 21084559-21085558 Brassica rapa FPsc
Brara.H02609 1.0kb downstream 1.0kb downstream 2593 true A08: 21085559-21088151 Brassica rapa FPsc
Brara.H02609 1.0kb downstream 1.0kb downstream 1000 false A08: 21087152-21088151 Brassica rapa FPsc
Brara.H02609 2.0kb upstream 2.0kb upstream 3593 true A08: 21083559-21087151 Brassica rapa FPsc
Brara.H02609 2.0kb upstream 2.0kb upstream 2000 false A08: 21083559-21085558 Brassica rapa FPsc
Brara.H02609 2.0kb downstream 2.0kb downstream 3593 true A08: 21085559-21089151 Brassica rapa FPsc
Brara.H02609 2.0kb downstream 2.0kb downstream 2000 false A08: 21087152-21089151 Brassica rapa FPsc
Brara.H02609 5.0kb upstream 5.0kb upstream 6593 true A08: 21080559-21087151 Brassica rapa FPsc
Brara.H02609 5.0kb upstream 5.0kb upstream 5000 false A08: 21080559-21085558 Brassica rapa FPsc
Brara.H02609 5.0kb downstream 5.0kb downstream 6593 true A08: 21085559-21092151 Brassica rapa FPsc
Brara.H02609 5.0kb downstream 5.0kb downstream 5000 false A08: 21087152-21092151 Brassica rapa FPsc
Brara.H02609 10.0kb upstream 10.0kb upstream 11593 true A08: 21075559-21087151 Brassica rapa FPsc
Brara.H02609 10.0kb upstream 10.0kb upstream 10000 false A08: 21075559-21085558 Brassica rapa FPsc
Brara.H02609 10.0kb downstream 10.0kb downstream 11593 true A08: 21085559-21097151 Brassica rapa FPsc
Brara.H02609 10.0kb downstream 10.0kb downstream 10000 false A08: 21087152-21097151 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361971 5261 Brassicaceae View MSA
123841424 5264 Brassicales-Malvales View MSA
124337126 5266 SBM View MSA
124241969 5268 Malvidae View MSA
124066653 5270 Rosid View MSA
123752989 5271 Pentapetalae View MSA
122793014 5272 Eudicot View MSA
122045384 5273 Angiosperm View MSA
121350449 5274 Embryophyte View MSA
123424640 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier