Gene : Brara.B01571 B. rapa FPsc v1.3
Defline:  (1 of 11) 1.13.11.12 - Linoleate 13S-lipoxygenase / Lipoxidase Genomic Order:  1571
Name:  ? Brara.B01571 Secondary Identifier:  ? PAC:30610604
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5409 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5410 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-735 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B01571 0.5kb upstream 0.5kb upstream 4299 true A02: 8830834-8835132 Brassica rapa FPsc
Brara.B01571 0.5kb upstream 0.5kb upstream 500 false A02: 8830834-8831333 Brassica rapa FPsc
Brara.B01571 0.5kb downstream 0.5kb downstream 4299 true A02: 8831334-8835632 Brassica rapa FPsc
Brara.B01571 0.5kb downstream 0.5kb downstream 500 false A02: 8835133-8835632 Brassica rapa FPsc
Brara.B01571 1.0kb upstream 1.0kb upstream 4799 true A02: 8830334-8835132 Brassica rapa FPsc
Brara.B01571 1.0kb upstream 1.0kb upstream 1000 false A02: 8830334-8831333 Brassica rapa FPsc
Brara.B01571 1.0kb downstream 1.0kb downstream 4799 true A02: 8831334-8836132 Brassica rapa FPsc
Brara.B01571 1.0kb downstream 1.0kb downstream 1000 false A02: 8835133-8836132 Brassica rapa FPsc
Brara.B01571 2.0kb upstream 2.0kb upstream 5799 true A02: 8829334-8835132 Brassica rapa FPsc
Brara.B01571 2.0kb upstream 2.0kb upstream 2000 false A02: 8829334-8831333 Brassica rapa FPsc
Brara.B01571 2.0kb downstream 2.0kb downstream 5799 true A02: 8831334-8837132 Brassica rapa FPsc
Brara.B01571 2.0kb downstream 2.0kb downstream 2000 false A02: 8835133-8837132 Brassica rapa FPsc
Brara.B01571 5.0kb upstream 5.0kb upstream 8799 true A02: 8826334-8835132 Brassica rapa FPsc
Brara.B01571 5.0kb upstream 5.0kb upstream 5000 false A02: 8826334-8831333 Brassica rapa FPsc
Brara.B01571 5.0kb downstream 5.0kb downstream 8799 true A02: 8831334-8840132 Brassica rapa FPsc
Brara.B01571 5.0kb downstream 5.0kb downstream 5000 false A02: 8835133-8840132 Brassica rapa FPsc
Brara.B01571 10.0kb upstream 10.0kb upstream 13799 true A02: 8821334-8835132 Brassica rapa FPsc
Brara.B01571 10.0kb upstream 10.0kb upstream 10000 false A02: 8821334-8831333 Brassica rapa FPsc
Brara.B01571 10.0kb downstream 10.0kb downstream 13799 true A02: 8831334-8845132 Brassica rapa FPsc
Brara.B01571 10.0kb downstream 10.0kb downstream 10000 false A02: 8835133-8845132 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363495 5261 Brassicaceae View MSA
123837104 5264 Brassicales-Malvales View MSA
124342225 5266 SBM View MSA
124251486 5268 Malvidae View MSA
124069762 5270 Rosid View MSA
123743667 5271 Pentapetalae View MSA
122789767 5272 Eudicot View MSA
122043119 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier