Gene : Brara.H02456 B. rapa FPsc v1.3
Defline:  (1 of 5) 1.1.1.95 - Phosphoglycerate dehydrogenase / Phosphoglyceric acid dehydrogenase Genomic Order:  2456
Name:  ? Brara.H02456 Secondary Identifier:  ? PAC:30648122
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc SER-GLYSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc SERSYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H02456 0.5kb upstream 0.5kb upstream 4861 true A08: 20534085-20538945 Brassica rapa FPsc
Brara.H02456 0.5kb upstream 0.5kb upstream 500 false A08: 20538446-20538945 Brassica rapa FPsc
Brara.H02456 0.5kb downstream 0.5kb downstream 4861 true A08: 20533585-20538445 Brassica rapa FPsc
Brara.H02456 0.5kb downstream 0.5kb downstream 500 false A08: 20533585-20534084 Brassica rapa FPsc
Brara.H02456 1.0kb upstream 1.0kb upstream 5361 true A08: 20534085-20539445 Brassica rapa FPsc
Brara.H02456 1.0kb upstream 1.0kb upstream 1000 false A08: 20538446-20539445 Brassica rapa FPsc
Brara.H02456 1.0kb downstream 1.0kb downstream 5361 true A08: 20533085-20538445 Brassica rapa FPsc
Brara.H02456 1.0kb downstream 1.0kb downstream 1000 false A08: 20533085-20534084 Brassica rapa FPsc
Brara.H02456 2.0kb upstream 2.0kb upstream 6361 true A08: 20534085-20540445 Brassica rapa FPsc
Brara.H02456 2.0kb upstream 2.0kb upstream 2000 false A08: 20538446-20540445 Brassica rapa FPsc
Brara.H02456 2.0kb downstream 2.0kb downstream 6361 true A08: 20532085-20538445 Brassica rapa FPsc
Brara.H02456 2.0kb downstream 2.0kb downstream 2000 false A08: 20532085-20534084 Brassica rapa FPsc
Brara.H02456 5.0kb upstream 5.0kb upstream 9361 true A08: 20534085-20543445 Brassica rapa FPsc
Brara.H02456 5.0kb upstream 5.0kb upstream 5000 false A08: 20538446-20543445 Brassica rapa FPsc
Brara.H02456 5.0kb downstream 5.0kb downstream 9361 true A08: 20529085-20538445 Brassica rapa FPsc
Brara.H02456 5.0kb downstream 5.0kb downstream 5000 false A08: 20529085-20534084 Brassica rapa FPsc
Brara.H02456 10.0kb upstream 10.0kb upstream 14361 true A08: 20534085-20548445 Brassica rapa FPsc
Brara.H02456 10.0kb upstream 10.0kb upstream 10000 false A08: 20538446-20548445 Brassica rapa FPsc
Brara.H02456 10.0kb downstream 10.0kb downstream 14361 true A08: 20524085-20538445 Brassica rapa FPsc
Brara.H02456 10.0kb downstream 10.0kb downstream 10000 false A08: 20524085-20534084 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363628 5261 Brassicaceae View MSA
123837054 5264 Brassicales-Malvales View MSA
124346998 5266 SBM View MSA
124246038 5268 Malvidae View MSA
124069252 5270 Rosid View MSA
123744106 5271 Pentapetalae View MSA
122795023 5272 Eudicot View MSA
122044765 5273 Angiosperm View MSA
121347094 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier