Gene : Brara.E00304 B. rapa FPsc v1.3
Defline:  (1 of 7) PTHR31165:SF10 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-RELATED Genomic Order:  304
Name:  ? Brara.E00304 Secondary Identifier:  ? PAC:30625328
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E00304 0.5kb upstream 0.5kb upstream 3006 true A05: 1682980-1685985 Brassica rapa FPsc
Brara.E00304 0.5kb upstream 0.5kb upstream 500 false A05: 1682980-1683479 Brassica rapa FPsc
Brara.E00304 0.5kb downstream 0.5kb downstream 3006 true A05: 1683480-1686485 Brassica rapa FPsc
Brara.E00304 0.5kb downstream 0.5kb downstream 500 false A05: 1685986-1686485 Brassica rapa FPsc
Brara.E00304 1.0kb upstream 1.0kb upstream 3506 true A05: 1682480-1685985 Brassica rapa FPsc
Brara.E00304 1.0kb upstream 1.0kb upstream 1000 false A05: 1682480-1683479 Brassica rapa FPsc
Brara.E00304 1.0kb downstream 1.0kb downstream 3506 true A05: 1683480-1686985 Brassica rapa FPsc
Brara.E00304 1.0kb downstream 1.0kb downstream 1000 false A05: 1685986-1686985 Brassica rapa FPsc
Brara.E00304 2.0kb upstream 2.0kb upstream 4506 true A05: 1681480-1685985 Brassica rapa FPsc
Brara.E00304 2.0kb upstream 2.0kb upstream 2000 false A05: 1681480-1683479 Brassica rapa FPsc
Brara.E00304 2.0kb downstream 2.0kb downstream 4506 true A05: 1683480-1687985 Brassica rapa FPsc
Brara.E00304 2.0kb downstream 2.0kb downstream 2000 false A05: 1685986-1687985 Brassica rapa FPsc
Brara.E00304 5.0kb upstream 5.0kb upstream 7506 true A05: 1678480-1685985 Brassica rapa FPsc
Brara.E00304 5.0kb upstream 5.0kb upstream 5000 false A05: 1678480-1683479 Brassica rapa FPsc
Brara.E00304 5.0kb downstream 5.0kb downstream 7506 true A05: 1683480-1690985 Brassica rapa FPsc
Brara.E00304 5.0kb downstream 5.0kb downstream 5000 false A05: 1685986-1690985 Brassica rapa FPsc
Brara.E00304 10.0kb upstream 10.0kb upstream 12506 true A05: 1673480-1685985 Brassica rapa FPsc
Brara.E00304 10.0kb upstream 10.0kb upstream 10000 false A05: 1673480-1683479 Brassica rapa FPsc
Brara.E00304 10.0kb downstream 10.0kb downstream 12506 true A05: 1683480-1695985 Brassica rapa FPsc
Brara.E00304 10.0kb downstream 10.0kb downstream 10000 false A05: 1685986-1695985 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792183 5273 Angiosperm View MSA
122349570 5261 Brassicaceae Singleton cluster - no MSA
123840948 5264 Brassicales-Malvales View MSA
124343824 5266 SBM View MSA
124247964 5268 Malvidae View MSA
124064953 5270 Rosid View MSA
123750207 5271 Pentapetalae View MSA
122796804 5272 Eudicot View MSA
121063429 5274 Embryophyte View MSA
123103178 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier