Gene : Brara.B01629 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR15588:SF9 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM8 Genomic Order:  1629
Name:  ? Brara.B01629 Secondary Identifier:  ? PAC:30607521
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B01629 0.5kb upstream 0.5kb upstream 2629 true A02: 9213647-9216275 Brassica rapa FPsc
Brara.B01629 0.5kb upstream 0.5kb upstream 500 false A02: 9215776-9216275 Brassica rapa FPsc
Brara.B01629 0.5kb downstream 0.5kb downstream 2629 true A02: 9213147-9215775 Brassica rapa FPsc
Brara.B01629 0.5kb downstream 0.5kb downstream 500 false A02: 9213147-9213646 Brassica rapa FPsc
Brara.B01629 1.0kb upstream 1.0kb upstream 3129 true A02: 9213647-9216775 Brassica rapa FPsc
Brara.B01629 1.0kb upstream 1.0kb upstream 1000 false A02: 9215776-9216775 Brassica rapa FPsc
Brara.B01629 1.0kb downstream 1.0kb downstream 3129 true A02: 9212647-9215775 Brassica rapa FPsc
Brara.B01629 1.0kb downstream 1.0kb downstream 1000 false A02: 9212647-9213646 Brassica rapa FPsc
Brara.B01629 2.0kb upstream 2.0kb upstream 4129 true A02: 9213647-9217775 Brassica rapa FPsc
Brara.B01629 2.0kb upstream 2.0kb upstream 2000 false A02: 9215776-9217775 Brassica rapa FPsc
Brara.B01629 2.0kb downstream 2.0kb downstream 4129 true A02: 9211647-9215775 Brassica rapa FPsc
Brara.B01629 2.0kb downstream 2.0kb downstream 2000 false A02: 9211647-9213646 Brassica rapa FPsc
Brara.B01629 5.0kb upstream 5.0kb upstream 7129 true A02: 9213647-9220775 Brassica rapa FPsc
Brara.B01629 5.0kb upstream 5.0kb upstream 5000 false A02: 9215776-9220775 Brassica rapa FPsc
Brara.B01629 5.0kb downstream 5.0kb downstream 7129 true A02: 9208647-9215775 Brassica rapa FPsc
Brara.B01629 5.0kb downstream 5.0kb downstream 5000 false A02: 9208647-9213646 Brassica rapa FPsc
Brara.B01629 10.0kb upstream 10.0kb upstream 12129 true A02: 9213647-9225775 Brassica rapa FPsc
Brara.B01629 10.0kb upstream 10.0kb upstream 10000 false A02: 9215776-9225775 Brassica rapa FPsc
Brara.B01629 10.0kb downstream 10.0kb downstream 12129 true A02: 9203647-9215775 Brassica rapa FPsc
Brara.B01629 10.0kb downstream 10.0kb downstream 10000 false A02: 9203647-9213646 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380629 5261 Brassicaceae View MSA
123830636 5264 Brassicales-Malvales View MSA
124338457 5266 SBM View MSA
124249658 5268 Malvidae View MSA
124065490 5270 Rosid View MSA
123746583 5271 Pentapetalae View MSA
122790911 5272 Eudicot View MSA
122047376 5273 Angiosperm View MSA
121345088 5274 Embryophyte View MSA
123423767 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier