Gene : Brara.E00191 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR22763:SF44 - E3 UBIQUITIN LIGASE Genomic Order:  191
Name:  ? Brara.E00191 Secondary Identifier:  ? PAC:30627383
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E00191 0.5kb upstream 0.5kb upstream 2466 true A05: 1075224-1077689 Brassica rapa FPsc
Brara.E00191 0.5kb upstream 0.5kb upstream 500 false A05: 1075224-1075723 Brassica rapa FPsc
Brara.E00191 0.5kb downstream 0.5kb downstream 2466 true A05: 1075724-1078189 Brassica rapa FPsc
Brara.E00191 0.5kb downstream 0.5kb downstream 500 false A05: 1077690-1078189 Brassica rapa FPsc
Brara.E00191 1.0kb upstream 1.0kb upstream 2966 true A05: 1074724-1077689 Brassica rapa FPsc
Brara.E00191 1.0kb upstream 1.0kb upstream 1000 false A05: 1074724-1075723 Brassica rapa FPsc
Brara.E00191 1.0kb downstream 1.0kb downstream 2966 true A05: 1075724-1078689 Brassica rapa FPsc
Brara.E00191 1.0kb downstream 1.0kb downstream 1000 false A05: 1077690-1078689 Brassica rapa FPsc
Brara.E00191 2.0kb upstream 2.0kb upstream 3966 true A05: 1073724-1077689 Brassica rapa FPsc
Brara.E00191 2.0kb upstream 2.0kb upstream 2000 false A05: 1073724-1075723 Brassica rapa FPsc
Brara.E00191 2.0kb downstream 2.0kb downstream 3966 true A05: 1075724-1079689 Brassica rapa FPsc
Brara.E00191 2.0kb downstream 2.0kb downstream 2000 false A05: 1077690-1079689 Brassica rapa FPsc
Brara.E00191 5.0kb upstream 5.0kb upstream 6966 true A05: 1070724-1077689 Brassica rapa FPsc
Brara.E00191 5.0kb upstream 5.0kb upstream 5000 false A05: 1070724-1075723 Brassica rapa FPsc
Brara.E00191 5.0kb downstream 5.0kb downstream 6966 true A05: 1075724-1082689 Brassica rapa FPsc
Brara.E00191 5.0kb downstream 5.0kb downstream 5000 false A05: 1077690-1082689 Brassica rapa FPsc
Brara.E00191 10.0kb upstream 10.0kb upstream 11966 true A05: 1065724-1077689 Brassica rapa FPsc
Brara.E00191 10.0kb upstream 10.0kb upstream 10000 false A05: 1065724-1075723 Brassica rapa FPsc
Brara.E00191 10.0kb downstream 10.0kb downstream 11966 true A05: 1075724-1087689 Brassica rapa FPsc
Brara.E00191 10.0kb downstream 10.0kb downstream 10000 false A05: 1077690-1087689 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122350005 5261 Brassicaceae Singleton cluster - no MSA
123839779 5264 Brassicales-Malvales View MSA
124341553 5266 SBM View MSA
124242912 5268 Malvidae View MSA
124070952 5270 Rosid View MSA
123745999 5271 Pentapetalae View MSA
122790564 5272 Eudicot View MSA
122048435 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier