Gene : Brara.H02379 B. rapa FPsc v1.3
Defline:  (1 of 19) PF02309//PF02362//PF06507 - AUX/IAA family (AUX_IAA) // B3 DNA binding domain (B3) // Auxin response factor (Auxin_resp) Genomic Order:  2379
Name:  ? Brara.H02379 Secondary Identifier:  ? PAC:30647365
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H02379 0.5kb upstream 0.5kb upstream 5119 true A08: 20204206-20209324 Brassica rapa FPsc
Brara.H02379 0.5kb upstream 0.5kb upstream 500 false A08: 20204206-20204705 Brassica rapa FPsc
Brara.H02379 0.5kb downstream 0.5kb downstream 5119 true A08: 20204706-20209824 Brassica rapa FPsc
Brara.H02379 0.5kb downstream 0.5kb downstream 500 false A08: 20209325-20209824 Brassica rapa FPsc
Brara.H02379 1.0kb upstream 1.0kb upstream 5619 true A08: 20203706-20209324 Brassica rapa FPsc
Brara.H02379 1.0kb upstream 1.0kb upstream 1000 false A08: 20203706-20204705 Brassica rapa FPsc
Brara.H02379 1.0kb downstream 1.0kb downstream 5619 true A08: 20204706-20210324 Brassica rapa FPsc
Brara.H02379 1.0kb downstream 1.0kb downstream 1000 false A08: 20209325-20210324 Brassica rapa FPsc
Brara.H02379 2.0kb upstream 2.0kb upstream 6619 true A08: 20202706-20209324 Brassica rapa FPsc
Brara.H02379 2.0kb upstream 2.0kb upstream 2000 false A08: 20202706-20204705 Brassica rapa FPsc
Brara.H02379 2.0kb downstream 2.0kb downstream 6619 true A08: 20204706-20211324 Brassica rapa FPsc
Brara.H02379 2.0kb downstream 2.0kb downstream 2000 false A08: 20209325-20211324 Brassica rapa FPsc
Brara.H02379 5.0kb upstream 5.0kb upstream 9619 true A08: 20199706-20209324 Brassica rapa FPsc
Brara.H02379 5.0kb upstream 5.0kb upstream 5000 false A08: 20199706-20204705 Brassica rapa FPsc
Brara.H02379 5.0kb downstream 5.0kb downstream 9619 true A08: 20204706-20214324 Brassica rapa FPsc
Brara.H02379 5.0kb downstream 5.0kb downstream 5000 false A08: 20209325-20214324 Brassica rapa FPsc
Brara.H02379 10.0kb upstream 10.0kb upstream 14619 true A08: 20194706-20209324 Brassica rapa FPsc
Brara.H02379 10.0kb upstream 10.0kb upstream 10000 false A08: 20194706-20204705 Brassica rapa FPsc
Brara.H02379 10.0kb downstream 10.0kb downstream 14619 true A08: 20204706-20219324 Brassica rapa FPsc
Brara.H02379 10.0kb downstream 10.0kb downstream 10000 false A08: 20209325-20219324 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122354899 5261 Brassicaceae Singleton cluster - no MSA
123842372 5264 Brassicales-Malvales View MSA
124323439 5266 SBM View MSA
124251074 5268 Malvidae View MSA
124073682 5270 Rosid View MSA
123741284 5271 Pentapetalae View MSA
122791344 5272 Eudicot View MSA
122042731 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier