Gene : Brara.H02405 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR11945:SF156 - MADS-BOX PROTEIN-RELATED Genomic Order:  2405
Name:  ? Brara.H02405 Secondary Identifier:  ? PAC:30648009
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H02405 0.5kb upstream 0.5kb upstream 2897 true A08: 20308209-20311105 Brassica rapa FPsc
Brara.H02405 0.5kb upstream 0.5kb upstream 500 false A08: 20310606-20311105 Brassica rapa FPsc
Brara.H02405 0.5kb downstream 0.5kb downstream 2897 true A08: 20307709-20310605 Brassica rapa FPsc
Brara.H02405 0.5kb downstream 0.5kb downstream 500 false A08: 20307709-20308208 Brassica rapa FPsc
Brara.H02405 1.0kb upstream 1.0kb upstream 3397 true A08: 20308209-20311605 Brassica rapa FPsc
Brara.H02405 1.0kb upstream 1.0kb upstream 1000 false A08: 20310606-20311605 Brassica rapa FPsc
Brara.H02405 1.0kb downstream 1.0kb downstream 3397 true A08: 20307209-20310605 Brassica rapa FPsc
Brara.H02405 1.0kb downstream 1.0kb downstream 1000 false A08: 20307209-20308208 Brassica rapa FPsc
Brara.H02405 2.0kb upstream 2.0kb upstream 4397 true A08: 20308209-20312605 Brassica rapa FPsc
Brara.H02405 2.0kb upstream 2.0kb upstream 2000 false A08: 20310606-20312605 Brassica rapa FPsc
Brara.H02405 2.0kb downstream 2.0kb downstream 4397 true A08: 20306209-20310605 Brassica rapa FPsc
Brara.H02405 2.0kb downstream 2.0kb downstream 2000 false A08: 20306209-20308208 Brassica rapa FPsc
Brara.H02405 5.0kb upstream 5.0kb upstream 7397 true A08: 20308209-20315605 Brassica rapa FPsc
Brara.H02405 5.0kb upstream 5.0kb upstream 5000 false A08: 20310606-20315605 Brassica rapa FPsc
Brara.H02405 5.0kb downstream 5.0kb downstream 7397 true A08: 20303209-20310605 Brassica rapa FPsc
Brara.H02405 5.0kb downstream 5.0kb downstream 5000 false A08: 20303209-20308208 Brassica rapa FPsc
Brara.H02405 10.0kb upstream 10.0kb upstream 12397 true A08: 20308209-20320605 Brassica rapa FPsc
Brara.H02405 10.0kb upstream 10.0kb upstream 10000 false A08: 20310606-20320605 Brassica rapa FPsc
Brara.H02405 10.0kb downstream 10.0kb downstream 12397 true A08: 20298209-20310605 Brassica rapa FPsc
Brara.H02405 10.0kb downstream 10.0kb downstream 10000 false A08: 20298209-20308208 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122355103 5261 Brassicaceae Singleton cluster - no MSA
123793396 5264 Brassicales-Malvales Singleton cluster - no MSA
124351043 5266 SBM View MSA
124244447 5268 Malvidae View MSA
124062317 5270 Rosid View MSA
123742642 5271 Pentapetalae View MSA
122791202 5272 Eudicot View MSA
122050633 5273 Angiosperm View MSA
121350455 5274 Embryophyte View MSA
123427239 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier