Gene : Brara.H02424 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR11614//PTHR11614:SF97 - PHOSPHOLIPASE-RELATED Genomic Order:  2424
Name:  ? Brara.H02424 Secondary Identifier:  ? PAC:30648083
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc LIPAS-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H02424 0.5kb upstream 0.5kb upstream 3185 true A08: 20418705-20421889 Brassica rapa FPsc
Brara.H02424 0.5kb upstream 0.5kb upstream 500 false A08: 20418705-20419204 Brassica rapa FPsc
Brara.H02424 0.5kb downstream 0.5kb downstream 3185 true A08: 20419205-20422389 Brassica rapa FPsc
Brara.H02424 0.5kb downstream 0.5kb downstream 500 false A08: 20421890-20422389 Brassica rapa FPsc
Brara.H02424 1.0kb upstream 1.0kb upstream 3685 true A08: 20418205-20421889 Brassica rapa FPsc
Brara.H02424 1.0kb upstream 1.0kb upstream 1000 false A08: 20418205-20419204 Brassica rapa FPsc
Brara.H02424 1.0kb downstream 1.0kb downstream 3685 true A08: 20419205-20422889 Brassica rapa FPsc
Brara.H02424 1.0kb downstream 1.0kb downstream 1000 false A08: 20421890-20422889 Brassica rapa FPsc
Brara.H02424 2.0kb upstream 2.0kb upstream 4685 true A08: 20417205-20421889 Brassica rapa FPsc
Brara.H02424 2.0kb upstream 2.0kb upstream 2000 false A08: 20417205-20419204 Brassica rapa FPsc
Brara.H02424 2.0kb downstream 2.0kb downstream 4685 true A08: 20419205-20423889 Brassica rapa FPsc
Brara.H02424 2.0kb downstream 2.0kb downstream 2000 false A08: 20421890-20423889 Brassica rapa FPsc
Brara.H02424 5.0kb upstream 5.0kb upstream 7685 true A08: 20414205-20421889 Brassica rapa FPsc
Brara.H02424 5.0kb upstream 5.0kb upstream 5000 false A08: 20414205-20419204 Brassica rapa FPsc
Brara.H02424 5.0kb downstream 5.0kb downstream 7685 true A08: 20419205-20426889 Brassica rapa FPsc
Brara.H02424 5.0kb downstream 5.0kb downstream 5000 false A08: 20421890-20426889 Brassica rapa FPsc
Brara.H02424 10.0kb upstream 10.0kb upstream 12685 true A08: 20409205-20421889 Brassica rapa FPsc
Brara.H02424 10.0kb upstream 10.0kb upstream 10000 false A08: 20409205-20419204 Brassica rapa FPsc
Brara.H02424 10.0kb downstream 10.0kb downstream 12685 true A08: 20419205-20431889 Brassica rapa FPsc
Brara.H02424 10.0kb downstream 10.0kb downstream 10000 false A08: 20421890-20431889 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371734 5261 Brassicaceae View MSA
123800221 5264 Brassicales-Malvales View MSA
124297663 5266 SBM View MSA
124149494 5268 Malvidae View MSA
123875295 5270 Rosid View MSA
123459143 5271 Pentapetalae View MSA
122494538 5272 Eudicot View MSA
122051494 5273 Angiosperm View MSA
121350082 5274 Embryophyte View MSA
123428617 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier