Gene : Brara.H02219 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR22573:SF47 - PHOSPHOGLUCOMUTASE, CYTOPLASMIC 1-RELATED Genomic Order:  2219
Name:  ? Brara.H02219 Secondary Identifier:  ? PAC:30649971
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc GLUCOSE1PMETAB-PWY Brassica rapa FPsc pathologic  
BrapaFPsc GLYCOGENSYNTH-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3801 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-622 Brassica rapa FPsc pathologic  
BrapaFPsc PWY66-422 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7238 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7343 Brassica rapa FPsc pathologic  
BrapaFPsc SUCSYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H02219 0.5kb upstream 0.5kb upstream 4787 true A08: 19393431-19398217 Brassica rapa FPsc
Brara.H02219 0.5kb upstream 0.5kb upstream 500 false A08: 19397718-19398217 Brassica rapa FPsc
Brara.H02219 0.5kb downstream 0.5kb downstream 4787 true A08: 19392931-19397717 Brassica rapa FPsc
Brara.H02219 0.5kb downstream 0.5kb downstream 500 false A08: 19392931-19393430 Brassica rapa FPsc
Brara.H02219 1.0kb upstream 1.0kb upstream 5287 true A08: 19393431-19398717 Brassica rapa FPsc
Brara.H02219 1.0kb upstream 1.0kb upstream 1000 false A08: 19397718-19398717 Brassica rapa FPsc
Brara.H02219 1.0kb downstream 1.0kb downstream 5287 true A08: 19392431-19397717 Brassica rapa FPsc
Brara.H02219 1.0kb downstream 1.0kb downstream 1000 false A08: 19392431-19393430 Brassica rapa FPsc
Brara.H02219 2.0kb upstream 2.0kb upstream 6287 true A08: 19393431-19399717 Brassica rapa FPsc
Brara.H02219 2.0kb upstream 2.0kb upstream 2000 false A08: 19397718-19399717 Brassica rapa FPsc
Brara.H02219 2.0kb downstream 2.0kb downstream 6287 true A08: 19391431-19397717 Brassica rapa FPsc
Brara.H02219 2.0kb downstream 2.0kb downstream 2000 false A08: 19391431-19393430 Brassica rapa FPsc
Brara.H02219 5.0kb upstream 5.0kb upstream 9287 true A08: 19393431-19402717 Brassica rapa FPsc
Brara.H02219 5.0kb upstream 5.0kb upstream 5000 false A08: 19397718-19402717 Brassica rapa FPsc
Brara.H02219 5.0kb downstream 5.0kb downstream 9287 true A08: 19388431-19397717 Brassica rapa FPsc
Brara.H02219 5.0kb downstream 5.0kb downstream 5000 false A08: 19388431-19393430 Brassica rapa FPsc
Brara.H02219 10.0kb upstream 10.0kb upstream 14287 true A08: 19393431-19407717 Brassica rapa FPsc
Brara.H02219 10.0kb upstream 10.0kb upstream 10000 false A08: 19397718-19407717 Brassica rapa FPsc
Brara.H02219 10.0kb downstream 10.0kb downstream 14287 true A08: 19383431-19397717 Brassica rapa FPsc
Brara.H02219 10.0kb downstream 10.0kb downstream 10000 false A08: 19383431-19393430 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364390 5261 Brassicaceae View MSA
123835209 5264 Brassicales-Malvales View MSA
124342115 5266 SBM View MSA
124253593 5268 Malvidae View MSA
124065382 5270 Rosid View MSA
123740036 5271 Pentapetalae View MSA
122791577 5272 Eudicot View MSA
122046067 5273 Angiosperm View MSA
121346784 5274 Embryophyte View MSA
123426013 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier