Gene : Brara.H02239 B. rapa FPsc v1.3
Defline:  (1 of 6) PTHR11695:SF492 - ALCOHOL DEHYDROGENASE-LIKE 1-RELATED Genomic Order:  2239
Name:  ? Brara.H02239 Secondary Identifier:  ? PAC:30650233
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5486 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5751 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6333 Brassica rapa FPsc pathologic  
BrapaFPsc PWY66-21 Brassica rapa FPsc pathologic  
BrapaFPsc PWY66-389 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6802 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H02239 0.5kb upstream 0.5kb upstream 2753 true A08: 19498669-19501421 Brassica rapa FPsc
Brara.H02239 0.5kb upstream 0.5kb upstream 500 false A08: 19500922-19501421 Brassica rapa FPsc
Brara.H02239 0.5kb downstream 0.5kb downstream 2753 true A08: 19498169-19500921 Brassica rapa FPsc
Brara.H02239 0.5kb downstream 0.5kb downstream 500 false A08: 19498169-19498668 Brassica rapa FPsc
Brara.H02239 1.0kb upstream 1.0kb upstream 3253 true A08: 19498669-19501921 Brassica rapa FPsc
Brara.H02239 1.0kb upstream 1.0kb upstream 1000 false A08: 19500922-19501921 Brassica rapa FPsc
Brara.H02239 1.0kb downstream 1.0kb downstream 3253 true A08: 19497669-19500921 Brassica rapa FPsc
Brara.H02239 1.0kb downstream 1.0kb downstream 1000 false A08: 19497669-19498668 Brassica rapa FPsc
Brara.H02239 2.0kb upstream 2.0kb upstream 4253 true A08: 19498669-19502921 Brassica rapa FPsc
Brara.H02239 2.0kb upstream 2.0kb upstream 2000 false A08: 19500922-19502921 Brassica rapa FPsc
Brara.H02239 2.0kb downstream 2.0kb downstream 4253 true A08: 19496669-19500921 Brassica rapa FPsc
Brara.H02239 2.0kb downstream 2.0kb downstream 2000 false A08: 19496669-19498668 Brassica rapa FPsc
Brara.H02239 5.0kb upstream 5.0kb upstream 7253 true A08: 19498669-19505921 Brassica rapa FPsc
Brara.H02239 5.0kb upstream 5.0kb upstream 5000 false A08: 19500922-19505921 Brassica rapa FPsc
Brara.H02239 5.0kb downstream 5.0kb downstream 7253 true A08: 19493669-19500921 Brassica rapa FPsc
Brara.H02239 5.0kb downstream 5.0kb downstream 5000 false A08: 19493669-19498668 Brassica rapa FPsc
Brara.H02239 10.0kb upstream 10.0kb upstream 12253 true A08: 19498669-19510921 Brassica rapa FPsc
Brara.H02239 10.0kb upstream 10.0kb upstream 10000 false A08: 19500922-19510921 Brassica rapa FPsc
Brara.H02239 10.0kb downstream 10.0kb downstream 12253 true A08: 19488669-19500921 Brassica rapa FPsc
Brara.H02239 10.0kb downstream 10.0kb downstream 10000 false A08: 19488669-19498668 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369605 5261 Brassicaceae View MSA
123839438 5264 Brassicales-Malvales View MSA
124339992 5266 SBM View MSA
124250138 5268 Malvidae View MSA
124072751 5270 Rosid View MSA
123744522 5271 Pentapetalae View MSA
122796931 5272 Eudicot View MSA
122046886 5273 Angiosperm View MSA
121310668 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier