Gene : Brara.H02284 B. rapa FPsc v1.3
Defline:  (1 of 4) 1.2.4.4 - 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) / Dehydrogenase, branched chain alpha-keto acid Genomic Order:  2284
Name:  ? Brara.H02284 Secondary Identifier:  ? PAC:30647708
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5046 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H02284 0.5kb upstream 0.5kb upstream 5105 true A08: 19741988-19747092 Brassica rapa FPsc
Brara.H02284 0.5kb upstream 0.5kb upstream 500 false A08: 19746593-19747092 Brassica rapa FPsc
Brara.H02284 0.5kb downstream 0.5kb downstream 5105 true A08: 19741488-19746592 Brassica rapa FPsc
Brara.H02284 0.5kb downstream 0.5kb downstream 500 false A08: 19741488-19741987 Brassica rapa FPsc
Brara.H02284 1.0kb upstream 1.0kb upstream 5605 true A08: 19741988-19747592 Brassica rapa FPsc
Brara.H02284 1.0kb upstream 1.0kb upstream 1000 false A08: 19746593-19747592 Brassica rapa FPsc
Brara.H02284 1.0kb downstream 1.0kb downstream 5605 true A08: 19740988-19746592 Brassica rapa FPsc
Brara.H02284 1.0kb downstream 1.0kb downstream 1000 false A08: 19740988-19741987 Brassica rapa FPsc
Brara.H02284 2.0kb upstream 2.0kb upstream 6605 true A08: 19741988-19748592 Brassica rapa FPsc
Brara.H02284 2.0kb upstream 2.0kb upstream 2000 false A08: 19746593-19748592 Brassica rapa FPsc
Brara.H02284 2.0kb downstream 2.0kb downstream 6605 true A08: 19739988-19746592 Brassica rapa FPsc
Brara.H02284 2.0kb downstream 2.0kb downstream 2000 false A08: 19739988-19741987 Brassica rapa FPsc
Brara.H02284 5.0kb upstream 5.0kb upstream 9605 true A08: 19741988-19751592 Brassica rapa FPsc
Brara.H02284 5.0kb upstream 5.0kb upstream 5000 false A08: 19746593-19751592 Brassica rapa FPsc
Brara.H02284 5.0kb downstream 5.0kb downstream 9605 true A08: 19736988-19746592 Brassica rapa FPsc
Brara.H02284 5.0kb downstream 5.0kb downstream 5000 false A08: 19736988-19741987 Brassica rapa FPsc
Brara.H02284 10.0kb upstream 10.0kb upstream 14605 true A08: 19741988-19756592 Brassica rapa FPsc
Brara.H02284 10.0kb upstream 10.0kb upstream 10000 false A08: 19746593-19756592 Brassica rapa FPsc
Brara.H02284 10.0kb downstream 10.0kb downstream 14605 true A08: 19731988-19746592 Brassica rapa FPsc
Brara.H02284 10.0kb downstream 10.0kb downstream 10000 false A08: 19731988-19741987 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377984 5261 Brassicaceae View MSA
123832958 5264 Brassicales-Malvales View MSA
124348231 5266 SBM View MSA
124244585 5268 Malvidae View MSA
124064753 5270 Rosid View MSA
123750640 5271 Pentapetalae View MSA
122791863 5272 Eudicot View MSA
122044172 5273 Angiosperm View MSA
121346270 5274 Embryophyte View MSA
123428672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier