Gene : Brara.I00686 B. rapa FPsc v1.3
Defline:  (1 of 9) PTHR31500:SF18 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Genomic Order:  686
Name:  ? Brara.I00686 Secondary Identifier:  ? PAC:30645766
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00686 0.5kb upstream 0.5kb upstream 3049 true A09: 3847235-3850283 Brassica rapa FPsc
Brara.I00686 0.5kb upstream 0.5kb upstream 500 false A09: 3847235-3847734 Brassica rapa FPsc
Brara.I00686 0.5kb downstream 0.5kb downstream 3049 true A09: 3847735-3850783 Brassica rapa FPsc
Brara.I00686 0.5kb downstream 0.5kb downstream 500 false A09: 3850284-3850783 Brassica rapa FPsc
Brara.I00686 1.0kb upstream 1.0kb upstream 3549 true A09: 3846735-3850283 Brassica rapa FPsc
Brara.I00686 1.0kb upstream 1.0kb upstream 1000 false A09: 3846735-3847734 Brassica rapa FPsc
Brara.I00686 1.0kb downstream 1.0kb downstream 3549 true A09: 3847735-3851283 Brassica rapa FPsc
Brara.I00686 1.0kb downstream 1.0kb downstream 1000 false A09: 3850284-3851283 Brassica rapa FPsc
Brara.I00686 2.0kb upstream 2.0kb upstream 4549 true A09: 3845735-3850283 Brassica rapa FPsc
Brara.I00686 2.0kb upstream 2.0kb upstream 2000 false A09: 3845735-3847734 Brassica rapa FPsc
Brara.I00686 2.0kb downstream 2.0kb downstream 4549 true A09: 3847735-3852283 Brassica rapa FPsc
Brara.I00686 2.0kb downstream 2.0kb downstream 2000 false A09: 3850284-3852283 Brassica rapa FPsc
Brara.I00686 5.0kb upstream 5.0kb upstream 7549 true A09: 3842735-3850283 Brassica rapa FPsc
Brara.I00686 5.0kb upstream 5.0kb upstream 5000 false A09: 3842735-3847734 Brassica rapa FPsc
Brara.I00686 5.0kb downstream 5.0kb downstream 7549 true A09: 3847735-3855283 Brassica rapa FPsc
Brara.I00686 5.0kb downstream 5.0kb downstream 5000 false A09: 3850284-3855283 Brassica rapa FPsc
Brara.I00686 10.0kb upstream 10.0kb upstream 12549 true A09: 3837735-3850283 Brassica rapa FPsc
Brara.I00686 10.0kb upstream 10.0kb upstream 10000 false A09: 3837735-3847734 Brassica rapa FPsc
Brara.I00686 10.0kb downstream 10.0kb downstream 12549 true A09: 3847735-3860283 Brassica rapa FPsc
Brara.I00686 10.0kb downstream 10.0kb downstream 10000 false A09: 3850284-3860283 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122354482 5261 Brassicaceae Singleton cluster - no MSA
123792868 5264 Brassicales-Malvales Singleton cluster - no MSA
124290730 5266 SBM Singleton cluster - no MSA
124251241 5268 Malvidae View MSA
124071035 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier