Gene : Brara.I00705 B. rapa FPsc v1.3
Defline:  (1 of 2) 1.1.1.267 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase / DXP-reductoisomerase Genomic Order:  705
Name:  ? Brara.I00705 Secondary Identifier:  ? PAC:30642275
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7560 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00705 0.5kb upstream 0.5kb upstream 3657 true A09: 3990122-3993778 Brassica rapa FPsc
Brara.I00705 0.5kb upstream 0.5kb upstream 500 false A09: 3993279-3993778 Brassica rapa FPsc
Brara.I00705 0.5kb downstream 0.5kb downstream 3657 true A09: 3989622-3993278 Brassica rapa FPsc
Brara.I00705 0.5kb downstream 0.5kb downstream 500 false A09: 3989622-3990121 Brassica rapa FPsc
Brara.I00705 1.0kb upstream 1.0kb upstream 4157 true A09: 3990122-3994278 Brassica rapa FPsc
Brara.I00705 1.0kb upstream 1.0kb upstream 1000 false A09: 3993279-3994278 Brassica rapa FPsc
Brara.I00705 1.0kb downstream 1.0kb downstream 4157 true A09: 3989122-3993278 Brassica rapa FPsc
Brara.I00705 1.0kb downstream 1.0kb downstream 1000 false A09: 3989122-3990121 Brassica rapa FPsc
Brara.I00705 2.0kb upstream 2.0kb upstream 5157 true A09: 3990122-3995278 Brassica rapa FPsc
Brara.I00705 2.0kb upstream 2.0kb upstream 2000 false A09: 3993279-3995278 Brassica rapa FPsc
Brara.I00705 2.0kb downstream 2.0kb downstream 5157 true A09: 3988122-3993278 Brassica rapa FPsc
Brara.I00705 2.0kb downstream 2.0kb downstream 2000 false A09: 3988122-3990121 Brassica rapa FPsc
Brara.I00705 5.0kb upstream 5.0kb upstream 8157 true A09: 3990122-3998278 Brassica rapa FPsc
Brara.I00705 5.0kb upstream 5.0kb upstream 5000 false A09: 3993279-3998278 Brassica rapa FPsc
Brara.I00705 5.0kb downstream 5.0kb downstream 8157 true A09: 3985122-3993278 Brassica rapa FPsc
Brara.I00705 5.0kb downstream 5.0kb downstream 5000 false A09: 3985122-3990121 Brassica rapa FPsc
Brara.I00705 10.0kb upstream 10.0kb upstream 13157 true A09: 3990122-4003278 Brassica rapa FPsc
Brara.I00705 10.0kb upstream 10.0kb upstream 10000 false A09: 3993279-4003278 Brassica rapa FPsc
Brara.I00705 10.0kb downstream 10.0kb downstream 13157 true A09: 3980122-3993278 Brassica rapa FPsc
Brara.I00705 10.0kb downstream 10.0kb downstream 10000 false A09: 3980122-3990121 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041406 5273 Angiosperm View MSA
122375878 5261 Brassicaceae View MSA
123827755 5264 Brassicales-Malvales View MSA
124341581 5266 SBM View MSA
124238446 5268 Malvidae View MSA
124066605 5270 Rosid View MSA
123736883 5271 Pentapetalae View MSA
122791920 5272 Eudicot View MSA
121344534 5274 Embryophyte View MSA
123424385 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier